RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 NDUFB10O96000 172 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 FAM86B2P0C5J1 330 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 TM4SF1P30408 202 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 MXI1P50539 228 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 ASTE1Q2TB18 679 aaPredicted RBP12.23□□□□□ -0.45
NXF1-211ENST00000531709 RINT1Q6NUQ1 792 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 C1orf54Q8WWF1 131 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 KIFAP3Q92845 792 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 SLC35C1Q96A29 364 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 HEMGNQ9BXL5 484 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 SLC40A1Q9NP59 571 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 ALS2Q96Q42 1657 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 ITGB3BPQ13352 177 aaPredicted RBP12.22□□□□□ -0.45
NXF1-211ENST00000531709 ARSHQ5FYA8 562 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 RC3H1Q5TC82 1133 aaKnown RBP12.22□□□□□ -0.45
NXF1-211ENST00000531709 JAMLQ86YT9 394 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 RBM46Q8TBY0 533 aaKnown RBP12.22□□□□□ -0.45
NXF1-211ENST00000531709 N4BP2L2Q92802 583 aaPredicted RBP12.22□□□□□ -0.45
NXF1-211ENST00000531709 FAM212AQ96EL1 285 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 ERP44Q9BS26 406 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 KCTD10Q9H3F6 313 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 DDX20Q9UHI6 824 aaKnown RBP12.22□□□□□ -0.45
NXF1-211ENST00000531709 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
NXF1-211ENST00000531709 ECEL1O95672 775 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 GPC5P78333 572 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 KAZNQ674X7 775 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 MIGA2Q7L4E1 593 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 OGFOD1Q8N543 542 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 ELMO3Q96BJ8 720 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 BTBD6Q96KE9 485 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 NEUROG2Q9H2A3 272 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 APEX2Q9UBZ4 518 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.22□□□□□ -0.45
NXF1-211ENST00000531709 GRIN2DO15399 1336 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 TOM1O60784 492 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 GAS8O95995 478 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 SHMT1P34896 483 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 PDE6CP51160 858 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 SLC12A3P55017 1021 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 XKR9Q5GH70 373 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 VSIG1Q86XK7 387 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 RHOT2Q8IXI1 618 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 SLC30A5Q8TAD4 765 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 DCAF4Q8WV16 495 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 RSRC1Q96IZ7 334 aaKnown RBP12.22□□□□□ -0.45
NXF1-211ENST00000531709 AGPAT1Q99943 283 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 DISP2A7MBM2 1401 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 NUP188Q5SRE5 1749 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 DCDC2CA8MYV0 355 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 ALAS1P13196 640 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 SMTNP53814 917 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 PEX3P56589 373 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 C6orf118Q5T5N4 469 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 TMEM179Q6ZVK1 233 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 PARP9Q8IXQ6 854 aa12.22□□□□□ -0.45
NXF1-211ENST00000531709 XPO6Q96QU8 1125 aaKnown RBP12.22□□□□□ -0.45
NXF1-211ENST00000531709 CYP26A1O43174 497 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 IFNB1P01574 187 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 KRT15P19012 456 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 LONRF1Q17RB8 773 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 NBPF9Q3BBW0 867 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 NT5DC3Q86UY8 548 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 LXNQ9BS40 222 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 ADAM33Q9BZ11 813 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 TESPA1A2RU30 521 aaPredicted RBP12.21□□□□□ -0.45
NXF1-211ENST00000531709 EML1O00423 815 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 TNNI1P19237 187 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 MAPK4P31152 587 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 ZCWPW2Q504Y3 356 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 COBLL1Q53SF7 1204 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 HP1BP3Q5SSJ5 553 aaPredicted RBP12.21□□□□□ -0.45
NXF1-211ENST00000531709 PADI6Q6TGC4 694 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 ARMC9Q7Z3E5 817 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 TMC3Q7Z5M5 1100 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 USP37Q86T82 979 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 SLC20A1Q8WUM9 679 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.21□□□□□ -0.456e-7■■■■■ 27.2
NXF1-211ENST00000531709 FNBP1Q96RU3 617 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 FAM118BQ9BPY3 351 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 TAS2R14Q9NYV8 317 aa12.21□□□□□ -0.45
NXF1-211ENST00000531709 SYNGAP1Q96PV0 1343 aa12.21□□□□□ -0.46
NXF1-211ENST00000531709 HIP1RO75146 1068 aa12.21□□□□□ -0.46
NXF1-211ENST00000531709 NEDD9Q14511 834 aa12.21□□□□□ -0.46
NXF1-211ENST00000531709 EPHA7Q15375 998 aa12.21□□□□□ -0.46
NXF1-211ENST00000531709 ARHGAP27Q6ZUM4 889 aa12.21□□□□□ -0.46
NXF1-211ENST00000531709 INTS8Q75QN2 995 aaKnown RBP12.21□□□□□ -0.46
NXF1-211ENST00000531709 KLHL29Q96CT2 875 aa12.21□□□□□ -0.46
NXF1-211ENST00000531709 ARHGEF26Q96DR7 871 aa12.21□□□□□ -0.46
NXF1-211ENST00000531709 SAAL1Q96ER3 474 aa12.21□□□□□ -0.46
NXF1-211ENST00000531709 TCHPQ9BT92 498 aa12.21□□□□□ -0.46
NXF1-211ENST00000531709 NUP85Q9BW27 656 aa12.21□□□□□ -0.46
NXF1-211ENST00000531709 MYH13Q9UKX3 1938 aa12.21□□□□□ -0.46
NXF1-211ENST00000531709 F8VZ95 297 aa12.2□□□□□ -0.46
NXF1-211ENST00000531709 COMTP21964 271 aa12.2□□□□□ -0.46
NXF1-211ENST00000531709 SSTR3P32745 418 aaPredicted RBP12.2□□□□□ -0.46
NXF1-211ENST00000531709 BYSLQ13895 437 aaKnown RBP12.2□□□□□ -0.46
NXF1-211ENST00000531709 CLUL1Q15846 466 aa12.2□□□□□ -0.46
NXF1-211ENST00000531709 UAP1Q16222 522 aaPredicted RBP12.2□□□□□ -0.46
NXF1-211ENST00000531709 HOMEZQ8IX15 550 aa12.2□□□□□ -0.46
NXF1-211ENST00000531709 NCAPGQ9BPX3 1015 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms