RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 NFYCQ13952 458 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 HABP4Q5JVS0 413 aaKnown RBP7.04□□□□□ -1.28
CASP4-210ENST00000531546 LBX2Q6XYB7 198 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 KRT28Q7Z3Y7 464 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 DNAJC10Q8IXB1 793 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 MICAL1Q8TDZ2 1067 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 PLA2G12BQ9BX93 195 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 C12orf65Q9H3J6 166 aaKnown RBP7.04□□□□□ -1.28
CASP4-210ENST00000531546 CCSER2Q9H7U1 834 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 STK32BQ9NY57 414 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 TELO2Q9Y4R8 837 aa7.04□□□□□ -1.28
CASP4-210ENST00000531546 NEXMIFQ5QGS0 1516 aa7.03□□□□□ -1.28
CASP4-210ENST00000531546 U2SURPO15042 1029 aaKnown RBP7.03□□□□□ -1.28
CASP4-210ENST00000531546 PLSCR1O15162 318 aa7.03□□□□□ -1.28
CASP4-210ENST00000531546 COL6A2P12110 1019 aa7.03□□□□□ -1.28
CASP4-210ENST00000531546 DUSP8Q13202 625 aa7.03□□□□□ -1.28
CASP4-210ENST00000531546 SLC10A6Q3KNW5 377 aa7.03□□□□□ -1.28
CASP4-210ENST00000531546 LDLRAD3Q86YD5 345 aa7.03□□□□□ -1.28
CASP4-210ENST00000531546 ZNF483Q8TF39 744 aaPredicted RBP7.03□□□□□ -1.28
CASP4-210ENST00000531546 DCAF4Q8WV16 495 aa7.03□□□□□ -1.28
CASP4-210ENST00000531546 MTFR1LQ9H019 292 aa7.03□□□□□ -1.28
CASP4-210ENST00000531546 PRKAG3Q9UGI9 489 aa7.03□□□□□ -1.28
CASP4-210ENST00000531546 PUF60Q9UHX1 559 aaKnown RBP7.03□□□□□ -1.28
CASP4-210ENST00000531546 FBXO10Q9UK96 956 aa7.03□□□□□ -1.28
CASP4-210ENST00000531546 MRVI1Q9Y6F6 885 aa7.03□□□□□ -1.28
CASP4-210ENST00000531546 COL14A1Q05707 1796 aaKnown RBP7.03□□□□□ -1.28
CASP4-210ENST00000531546 NKRFO15226 690 aaKnown RBP eCLIP7.02□□□□□ -1.29
CASP4-210ENST00000531546 ARHGAP6O43182 974 aa7.02□□□□□ -1.29
CASP4-210ENST00000531546 ZNF808Q8N4W9 903 aaPredicted RBP7.02□□□□□ -1.29
CASP4-210ENST00000531546 KCNJ15Q99712 375 aa7.02□□□□□ -1.29
CASP4-210ENST00000531546 SLC39A2Q9NP94 309 aa7.02□□□□□ -1.29
CASP4-210ENST00000531546 KIF1AQ12756 1690 aa7.01□□□□□ -1.29
CASP4-210ENST00000531546 CDC42BPGQ6DT37 1551 aa7.01□□□□□ -1.29
CASP4-210ENST00000531546 DLX3O60479 287 aa7.01□□□□□ -1.29
CASP4-210ENST00000531546 DBPQ10586 325 aaPredicted RBP7.01□□□□□ -1.29
CASP4-210ENST00000531546 MRGPRGQ86SM5 289 aa7.01□□□□□ -1.29
CASP4-210ENST00000531546 CRAMP1Q96RY5 1269 aa7.01□□□□□ -1.29
CASP4-210ENST00000531546 MMRN2Q9H8L6 949 aa7.01□□□□□ -1.29
CASP4-210ENST00000531546 CAPN10Q9HC96 672 aa7.01□□□□□ -1.29
CASP4-210ENST00000531546 TLR9Q9NR96 1032 aa7.01□□□□□ -1.29
CASP4-210ENST00000531546 TECPR2O15040 1411 aa7.01□□□□□ -1.29
CASP4-210ENST00000531546 ARHGEF10O15013 1369 aa7□□□□□ -1.29
CASP4-210ENST00000531546 A0A1W2PQU0 124 aa7□□□□□ -1.29
CASP4-210ENST00000531546 FAM47E-STBD1D6RA91 191 aa7□□□□□ -1.29
CASP4-210ENST00000531546 ACOT7O00154 380 aa7□□□□□ -1.29
CASP4-210ENST00000531546 MATN2O00339 956 aa7□□□□□ -1.29
CASP4-210ENST00000531546 HMGCRP04035 888 aa7□□□□□ -1.29
CASP4-210ENST00000531546 HIBADHP31937 336 aaKnown RBP7□□□□□ -1.29
CASP4-210ENST00000531546 HHEXQ03014 270 aa7□□□□□ -1.29
CASP4-210ENST00000531546 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
CASP4-210ENST00000531546 WDR72Q3MJ13 1102 aa7□□□□□ -1.29
CASP4-210ENST00000531546 PUM2Q8TB72 1066 aaKnown RBP eCLIP7□□□□□ -1.29
CASP4-210ENST00000531546 ZG16BQ96DA0 208 aa7□□□□□ -1.29
CASP4-210ENST00000531546 ZNF703Q9H7S9 590 aaPredicted RBP7□□□□□ -1.29
CASP4-210ENST00000531546 PRDM11Q9NQV5 511 aa7□□□□□ -1.29
CASP4-210ENST00000531546 ARHGAP28Q9P2N2 729 aa7□□□□□ -1.29
CASP4-210ENST00000531546 WDR90Q96KV7 1748 aa7□□□□□ -1.29
CASP4-210ENST00000531546 IQGAP3Q86VI3 1631 aa7□□□□□ -1.29
CASP4-210ENST00000531546 HFM1A2PYH4 1435 aa7□□□□□ -1.29
CASP4-210ENST00000531546 ANKRD50Q9ULJ7 1429 aa7□□□□□ -1.29
CASP4-210ENST00000531546 AATKQ6ZMQ8 1374 aa6.99□□□□□ -1.29
CASP4-210ENST00000531546 SOD2P04179 222 aa6.99□□□□□ -1.29
CASP4-210ENST00000531546 GPR85P60893 370 aa6.99□□□□□ -1.29
CASP4-210ENST00000531546 HSP90AA2PQ14568 343 aaPredicted RBP6.99□□□□□ -1.29
CASP4-210ENST00000531546 CXXC5Q7LFL8 322 aaKnown RBP6.99□□□□□ -1.29
CASP4-210ENST00000531546 VPS37DQ86XT2 251 aa6.99□□□□□ -1.29
CASP4-210ENST00000531546 IFNL3Q8IZI9 196 aa6.99□□□□□ -1.29
CASP4-210ENST00000531546 DNAJC5GQ8N7S2 189 aa6.99□□□□□ -1.29
CASP4-210ENST00000531546 PRRX2Q99811 253 aa6.99□□□□□ -1.29
CASP4-210ENST00000531546 ZDHHC5Q9C0B5 715 aa6.99□□□□□ -1.29
CASP4-210ENST00000531546 NAIPQ13075 1403 aa6.99□□□□□ -1.29
CASP4-210ENST00000531546 RRBP1Q9P2E9 1410 aaKnown RBP6.99□□□□□ -1.29
CASP4-210ENST00000531546 SPATA31A1Q5TZJ5 1347 aa6.99□□□□□ -1.29
CASP4-210ENST00000531546 MAP3K5Q99683 1374 aa6.98□□□□□ -1.29
CASP4-210ENST00000531546 RGPD3A6NKT7 1758 aaPredicted RBP6.98□□□□□ -1.29
CASP4-210ENST00000531546 RGPD4Q7Z3J3 1758 aa6.98□□□□□ -1.29
CASP4-210ENST00000531546 E9PCH4 1651 aa6.98□□□□□ -1.29
CASP4-210ENST00000531546 GJB6O95452 261 aa6.98□□□□□ -1.29
CASP4-210ENST00000531546 MSX2P35548 267 aaPredicted RBP6.98□□□□□ -1.29
CASP4-210ENST00000531546 FOXL1Q12952 345 aa6.98□□□□□ -1.29
CASP4-210ENST00000531546 FNDC7Q5VTL7 733 aa6.98□□□□□ -1.29
CASP4-210ENST00000531546 USP30Q70CQ3 517 aa6.98□□□□□ -1.29
CASP4-210ENST00000531546 DPH6Q7L8W6 267 aa6.98□□□□□ -1.29
CASP4-210ENST00000531546 NLGN4XQ8N0W4 816 aa6.98□□□□□ -1.29
CASP4-210ENST00000531546 LARP4BQ92615 738 aaKnown RBP6.98□□□□□ -1.29
CASP4-210ENST00000531546 NELFAQ9H3P2 528 aa6.98□□□□□ -1.29
CASP4-210ENST00000531546 PLA2G3Q9NZ20 509 aa6.98□□□□□ -1.29
CASP4-210ENST00000531546 ROCK1Q13464 1354 aa6.97□□□□□ -1.29
CASP4-210ENST00000531546 CYP27B1O15528 508 aa6.97□□□□□ -1.29
CASP4-210ENST00000531546 EVA1CP58658 441 aa6.97□□□□□ -1.29
CASP4-210ENST00000531546 NOLC1Q14978 699 aaKnown RBP eCLIP6.97□□□□□ -1.29
CASP4-210ENST00000531546 SLC15A2Q16348 729 aa6.97□□□□□ -1.29
CASP4-210ENST00000531546 TNS2Q63HR2 1409 aa6.97□□□□□ -1.29
CASP4-210ENST00000531546 STYK1Q6J9G0 422 aa6.97□□□□□ -1.29
CASP4-210ENST00000531546 SGSM3Q96HU1 749 aa6.97□□□□□ -1.29
CASP4-210ENST00000531546 ALG1Q9BT22 464 aa6.97□□□□□ -1.29
CASP4-210ENST00000531546 AARSD1Q9BTE6 412 aaKnown RBP6.97□□□□□ -1.29
CASP4-210ENST00000531546 CD244Q9BZW8 370 aa6.97□□□□□ -1.29
CASP4-210ENST00000531546 GIT1Q9Y2X7 761 aa6.97□□□□□ -1.29
CASP4-210ENST00000531546 RGPD8O14715 1765 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms