RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 CPLX2Q6PUV4 134 aaKnown RBP14.4□□□□□ -0.1
TM9SF1-211ENST00000531406 HELQQ8TDG4 1101 aa14.4□□□□□ -0.1
TM9SF1-211ENST00000531406 MFSD14AQ96MC6 490 aa14.4□□□□□ -0.1
TM9SF1-211ENST00000531406 AIFM3Q96NN9 605 aa14.4□□□□□ -0.1
TM9SF1-211ENST00000531406 SH2D3AQ9BRG2 576 aa14.4□□□□□ -0.1
TM9SF1-211ENST00000531406 S1PR5Q9H228 398 aa14.4□□□□□ -0.1
TM9SF1-211ENST00000531406 CHST12Q9NRB3 414 aa14.4□□□□□ -0.1
TM9SF1-211ENST00000531406 DACT1Q9NYF0 836 aa14.4□□□□□ -0.1
TM9SF1-211ENST00000531406 SUCLA2Q9P2R7 463 aaPredicted RBP14.4□□□□□ -0.1
TM9SF1-211ENST00000531406 DDX25Q9UHL0 483 aaKnown RBP14.4□□□□□ -0.1
TM9SF1-211ENST00000531406 KIAA1671Q9BY89 1806 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 A0A087WZ62 844 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 MAFO75444 373 aaPredicted RBP14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 SRGAP2BP0DMP2 458 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 TECP42680 631 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 INF2Q27J81 1249 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 ANKRD54Q6NXT1 300 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 LLGL2Q6P1M3 1020 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 TRIM67Q6ZTA4 783 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 ANO5Q75V66 913 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 KRT25Q7Z3Z0 450 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 TMC7Q7Z402 723 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 SLC39A11Q8N1S5 342 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 RPGRIP1Q96KN7 1286 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 FDXACB1Q9BRP7 624 aaPredicted RBP14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 TRAIPQ9BWF2 469 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 KCNH6Q9H252 994 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 PDRG1Q9NUG6 133 aa14.39□□□□□ -0.11
TM9SF1-211ENST00000531406 SLC37A4O43826 429 aa14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 SFPQP23246 707 aaKnown RBP eCLIP14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 PHKA2P46019 1235 aa14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 PSMC5P62195 406 aa14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 ZXDAP98168 799 aa14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 SYCE2Q6PIF2 218 aa14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 BMP8AQ7Z5Y6 402 aa14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 ZNF410Q86VK4 478 aa14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 RHPN2Q8IUC4 686 aa14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 MRPL43Q8N983 215 aaKnown RBP14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 FBXL18Q96ME1 805 aa14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 MRPL9Q9BYD2 267 aaKnown RBP14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 KCNJ14Q9UNX9 436 aa14.38□□□□□ -0.11
TM9SF1-211ENST00000531406 TMEM221A6NGB7 291 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 NT5C1B-RDH14C9J2C7 533 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 M0R296 226 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 EML1O00423 815 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 HOXB8P17481 243 aaPredicted RBP14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 ALDH7A1P49419 539 aaKnown RBP14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 BCAR1P56945 870 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 NHLH1Q02575 133 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 SMC1AQ14683 1233 aaKnown RBP14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 LETM2Q2VYF4 491 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 PLA2G4FQ68DD2 849 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 KSR1Q8IVT5 923 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 FAM20AQ96MK3 541 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 JPH2Q9BR39 696 aaPredicted RBP14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 PHF20Q9BVI0 1012 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 APOL5Q9BWW9 433 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 INO80BQ9C086 356 aaPredicted RBP14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 KCNMB3Q9NPA1 279 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 VAV3Q9UKW4 847 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 C5orf42Q9H799 3197 aa14.37□□□□□ -0.11
TM9SF1-211ENST00000531406 MUC6Q6W4X9 2439 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 CCDC194A0A1B0GVG4 234 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 C2orf71A6NGG8 1288 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 CDKL5O76039 1030 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 SKIP12755 728 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 QARSP47897 775 aaKnown RBP14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 NPEPPSP55786 919 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 PPP2R5CQ13362 524 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 LONRF3Q496Y0 759 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 TWF2Q6IBS0 349 aaKnown RBP14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 PPP4R3AQ6IN85 833 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 GLB1LQ6UWU2 654 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 CATSPER4Q7RTX7 472 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 ALYREFQ86V81 257 aaKnown RBP14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 RSPH1Q8WYR4 309 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 CASP10Q92851 521 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 LPPQ93052 612 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 PBXIP1Q96AQ6 731 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 NLRP4Q96MN2 994 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 CYP26B1Q9NR63 512 aa14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 PIN4Q9Y237 131 aaKnown RBP14.36□□□□□ -0.11
TM9SF1-211ENST00000531406 PLXNA4Q9HCM2 1894 aa14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 LOXHD1Q8IVV2 1947 aa14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 EIF5BO60841 1220 aaKnown RBP14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 CLASP2O75122 1294 aaKnown RBP14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 ZNF623O75123 536 aa14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 CXCL14O95715 111 aa14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 GCFC2P16383 781 aaKnown RBP14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 SCRN1Q12765 414 aa14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 TPRNQ4KMQ1 711 aa14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 NOMO2Q5JPE7 1267 aa14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 NEK8Q86SG6 692 aa14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 ZNF579Q8NAF0 562 aaKnown RBP14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 TMEM169Q96HH4 297 aa14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 SLKQ9H2G2 1235 aaPredicted RBP14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 IFT122Q9HBG6 1241 aa14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 GJB4Q9NTQ9 266 aa14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 FAM105AQ9NUU6 356 aa14.35□□□□□ -0.11
TM9SF1-211ENST00000531406 HCFC2Q9Y5Z7 792 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms