RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 GTF2BQ00403 316 aa13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 MXD4Q14582 209 aaPredicted RBP13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 KNOP1Q1ED39 458 aaKnown RBP13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 SLC9C1Q4G0N8 1177 aa13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 MARCH8Q5T0T0 291 aa13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 L1TD1Q5T7N2 865 aaKnown RBP13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 EFCAB12Q6NXP0 572 aa13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 TTI2Q6NXR4 508 aa13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 MTHFD1LQ6UB35 978 aa13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 HAUS6Q7Z4H7 955 aa13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 LINC01465Q8N7H1 131 aa13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 BSNDQ8WZ55 320 aa13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 TSEN34Q9BSV6 310 aaKnown RBP13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 SUGCTQ9HAC7 445 aa13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 KMT5AQ9NQR1 393 aa13.24□□□□□ -0.29
UBASH3B-207ENST00000530917 CCDC169A6NNP5 214 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 K7ENM7 598 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 SLC16A4O15374 487 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 CABYRO75952 493 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 ASGR1P07306 291 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 GNAT1P11488 350 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 TMOD1P28289 359 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 HOXD13P35453 343 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 NAMPTP43490 491 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 PMS1P54277 932 aaKnown RBP13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 TPM4P67936 248 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 ADAM17P78536 824 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 LRRC63Q05C16 580 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 DRP2Q13474 957 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 PKN2Q16513 984 aaKnown RBP13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 ZC2HC1CQ53FD0 456 aaPredicted RBP13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 ANKRD40Q6AI12 368 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 CXCL17Q6UXB2 119 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 METTL13Q8N6R0 699 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 ARRDC4Q8NCT1 418 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 TMEM161BQ8NDZ6 487 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 ASAP3Q8TDY4 903 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 PRPF31Q8WWY3 499 aaKnown RBP13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 PSPC1Q8WXF1 523 aaKnown RBP13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 HVCN1Q96D96 273 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 DUSP9Q99956 384 aaKnown RBP13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 KCTD10Q9H3F6 313 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 SETD4Q9NVD3 440 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 SUCLA2Q9P2R7 463 aaPredicted RBP13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 NFE2L3Q9Y4A8 694 aa13.23□□□□□ -0.29
UBASH3B-207ENST00000530917 MBLAC1A4D2B0 266 aaPredicted RBP13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 PDXKO00764 312 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 HOXC8P31273 242 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 CHMP4BP1P59074 171 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 POU5F1BQ06416 359 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 LAMTOR4Q0VGL1 99 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 TPD52L1Q16890 204 aaPredicted RBP13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 ZCWPW2Q504Y3 356 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 FBXO46Q6PJ61 603 aaPredicted RBP13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 PPP4R3CPQ6ZMV5 832 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 SESTD1Q86VW0 696 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 NELFCDQ8IXH7 590 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 LRRC71Q8N4P6 559 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 C7orf31Q8N865 590 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 NOC3LQ8WTT2 800 aaKnown RBP13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 LMBR1Q8WVP7 490 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 ACCSQ96QU6 501 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 TSG101Q99816 390 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 UNC93B1Q9H1C4 597 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 HSD3B7Q9H2F3 369 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 TMEM206Q9H813 350 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 PAK6Q9NQU5 681 aaPredicted RBP13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 FANCLQ9NW38 375 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 ARHGAP28Q9P2N2 729 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 HDAC6Q9UBN7 1215 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 CENPFP49454 3210 aa13.22□□□□□ -0.29
UBASH3B-207ENST00000530917 HTTP42858 3142 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 SMIM35A0A1B0GVV1 85 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 C17orf102A2RUQ5 167 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 TRIM49BA6NDI0 452 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 MOXD2PA6NHM9 499 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 FGFR1OPO95684 399 aaKnown RBP13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 CCL5P13501 91 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 CLCN3P51790 818 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 ACLYP53396 1101 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 CDC42EP1Q00587 391 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 KCNA1Q09470 495 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 CAPSQ13938 189 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 TFDP1Q14186 410 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 EDRF1Q3B7T1 1238 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 NBPF20Q3BBV1 942 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 NFRKBQ6P4R8 1299 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 KIAA0319LQ8IZA0 1049 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 DEPTORQ8TB45 409 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 TMEM134Q9H6X4 195 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 TYW1Q9NV66 732 aaKnown RBP13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 CGNQ9P2M7 1197 aaKnown RBP13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 TBX20Q9UMR3 447 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 TRAF3IP3Q9Y228 551 aa13.21□□□□□ -0.29
UBASH3B-207ENST00000530917 ADGRA3Q8IWK6 1321 aa13.2□□□□□ -0.3
UBASH3B-207ENST00000530917 DENND3A2RUS2 1198 aa13.2□□□□□ -0.3
UBASH3B-207ENST00000530917 LRRIQ4A6NIV6 560 aa13.2□□□□□ -0.3
UBASH3B-207ENST00000530917 TGFB1I1O43294 461 aa13.2□□□□□ -0.3
UBASH3B-207ENST00000530917 CALUO43852 315 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms