RNA–Protein interactions for RNA: ENST00000530721.5

RPS3-216, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-216ENST00000530721 SUCLA2Q9P2R7 463 aaPredicted RBP14.37□□□□□ -0.11
RPS3-216ENST00000530721 CD207Q9UJ71 328 aa14.37□□□□□ -0.11
RPS3-216ENST00000530721 LZTS1Q9Y250 596 aa14.37□□□□□ -0.11
RPS3-216ENST00000530721 PPME1Q9Y570 386 aa14.37□□□□□ -0.11
RPS3-216ENST00000530721 FSD2A1L4K1 749 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 GPR37L1O60883 481 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 CSDE1O75534 798 aaKnown RBP14.36□□□□□ -0.11
RPS3-216ENST00000530721 LARGE1O95461 756 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 FDPSP14324 419 aaKnown RBP14.36□□□□□ -0.11
RPS3-216ENST00000530721 PPM1AP35813 382 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 PLCB3Q01970 1234 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 NR5A1Q13285 461 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 EPHA7Q15375 998 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 EARS2Q5JPH6 523 aaKnown RBP14.36□□□□□ -0.11
RPS3-216ENST00000530721 CLLU1OSQ5K130 101 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 LRRC55Q6ZSA7 311 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 RBM23Q86U06 439 aaKnown RBP14.36□□□□□ -0.11
RPS3-216ENST00000530721 ZNF598Q86UK7 904 aaKnown RBP14.36□□□□□ -0.11
RPS3-216ENST00000530721 RHPN2Q8IUC4 686 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 EXOC8Q8IYI6 725 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 SLFN12Q8IYM2 578 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 NECAB1Q8N987 351 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 RNF169Q8NCN4 708 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 SLC7A3Q8WY07 619 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 MSLNLQ96KJ4 702 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 POP1Q99575 1024 aaKnown RBP14.36□□□□□ -0.11
RPS3-216ENST00000530721 CDCA3Q99618 268 aaPredicted RBP14.36□□□□□ -0.11
RPS3-216ENST00000530721 LRFN3Q9BTN0 628 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 TLE6Q9H808 572 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 PUF60Q9UHX1 559 aaKnown RBP14.36□□□□□ -0.11
RPS3-216ENST00000530721 PCDHGC5Q9Y5F6 944 aa14.36□□□□□ -0.11
RPS3-216ENST00000530721 C19orf67A6NJJ6 358 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 BAG4O95429 457 aaKnown RBP14.35□□□□□ -0.11
RPS3-216ENST00000530721 EYA4O95677 639 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 ALADP13716 330 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 ATF7P17544 494 aaPredicted RBP14.35□□□□□ -0.11
RPS3-216ENST00000530721 NEK4P51957 841 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 POLGP54098 1239 aaPredicted RBP14.35□□□□□ -0.11
RPS3-216ENST00000530721 NPEPPSP55786 919 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 ERVFC1P60507 584 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 KCNT2Q6UVM3 1135 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 C4orf19Q8IY42 314 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 NSUN7Q8NE18 718 aaKnown RBP14.35□□□□□ -0.11
RPS3-216ENST00000530721 RSPH1Q8WYR4 309 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 MRPS27Q92552 414 aaKnown RBP14.35□□□□□ -0.11
RPS3-216ENST00000530721 TNFRSF25Q93038 417 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 CEP170P1Q96L14 293 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 NLRP4Q96MN2 994 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 ZNF558Q96NG5 402 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 LXNQ9BS40 222 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 TRAIPQ9BWF2 469 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 MRPL9Q9BYD2 267 aaKnown RBP14.35□□□□□ -0.11
RPS3-216ENST00000530721 C11orf16Q9NQ32 467 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 CLEC1BQ9P126 229 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 WRAP73Q9P2S5 460 aaPredicted RBP14.35□□□□□ -0.11
RPS3-216ENST00000530721 RAPGEFL1Q9UHV5 662 aa14.35□□□□□ -0.11
RPS3-216ENST00000530721 C5orf42Q9H799 3197 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 FAM205CA6NFA0 338 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 FSCN2O14926 492 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 GLP2RO95838 553 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 SKIP12755 728 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 YWHABP31946 246 aaKnown RBP14.34□□□□□ -0.11
RPS3-216ENST00000530721 RFC5P40937 340 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 PHKA2P46019 1235 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 KRT17Q04695 432 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 SPIRE1Q08AE8 756 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 COASYQ13057 564 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 DUSP6Q16828 381 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 TWF2Q6IBS0 349 aaKnown RBP14.34□□□□□ -0.11
RPS3-216ENST00000530721 NCAPH2Q6IBW4 605 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 OTUD6AQ7L8S5 288 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 KSR1Q8IVT5 923 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 SMRP1Q8NCR6 262 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 HELQQ8TDG4 1101 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 DHX33Q9H6R0 707 aaKnown RBP14.34□□□□□ -0.11
RPS3-216ENST00000530721 ZSWIM4Q9H7M6 989 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 RGL1Q9NZL6 768 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 PIN4Q9Y237 131 aaKnown RBP14.34□□□□□ -0.11
RPS3-216ENST00000530721 COL4A3BPQ9Y5P4 624 aa14.34□□□□□ -0.11
RPS3-216ENST00000530721 FAM86C2PA6NEL3 165 aa14.33□□□□□ -0.12
RPS3-216ENST00000530721 PER2O15055 1255 aa14.33□□□□□ -0.12
RPS3-216ENST00000530721 GAS2O43903 313 aaKnown RBP14.33□□□□□ -0.12
RPS3-216ENST00000530721 PBX3P40426 434 aa14.33□□□□□ -0.12
RPS3-216ENST00000530721 RAB27AP51159 221 aa14.33□□□□□ -0.12
RPS3-216ENST00000530721 TRIM29Q14134 588 aa14.33□□□□□ -0.12
RPS3-216ENST00000530721 PLPP4Q5VZY2 271 aa14.33□□□□□ -0.12
RPS3-216ENST00000530721 CATSPER4Q7RTX7 472 aa14.33□□□□□ -0.12
RPS3-216ENST00000530721 ZNF579Q8NAF0 562 aaKnown RBP14.33□□□□□ -0.12
RPS3-216ENST00000530721 PSPC1Q8WXF1 523 aaKnown RBP14.33□□□□□ -0.12
RPS3-216ENST00000530721 DYDC2Q96IM9 177 aa14.33□□□□□ -0.12
RPS3-216ENST00000530721 TCF25Q9BQ70 676 aa14.33□□□□□ -0.12
RPS3-216ENST00000530721 IFT122Q9HBG6 1241 aa14.33□□□□□ -0.12
RPS3-216ENST00000530721 NGRNQ9NPE2 291 aaKnown RBP14.33□□□□□ -0.12
RPS3-216ENST00000530721 ENTPD7Q9NQZ7 604 aa14.33□□□□□ -0.12
RPS3-216ENST00000530721 SPG21Q9NZD8 308 aa14.33□□□□□ -0.12
RPS3-216ENST00000530721 BARX2Q9UMQ3 279 aaPredicted RBP14.33□□□□□ -0.12
RPS3-216ENST00000530721 BTBD18B2RXH4 712 aa14.32□□□□□ -0.12
RPS3-216ENST00000530721 DCXO43602 365 aa14.32□□□□□ -0.12
RPS3-216ENST00000530721 JAK2O60674 1132 aa14.32□□□□□ -0.12
RPS3-216ENST00000530721 SRGAP2BP0DMP2 458 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms