RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 LMCD1Q9NZU5 365 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 GABBR1Q9UBS5 961 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 SEPT9Q9UHD8 586 aaPredicted RBP5.32□□□□□ -1.56
SSBP3-213ENST00000530618 KCNH3Q9ULD8 1083 aa5.32□□□□□ -1.56
SSBP3-213ENST00000530618 NRCAMQ92823 1304 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 IGSF9BQ9UPX0 1349 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 ABHD14A-ACY1A0A1B0GW23 586 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 H3BRB1 525 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 TREHO43280 583 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 SORBS3O60504 671 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 PRPF40AO75400 957 aaKnown RBP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 DGAT1O75907 488 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 LYPLA2O95372 231 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 OATP04181 439 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 LGALS2P05162 132 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 SSBP05455 408 aaKnown RBP eCLIP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 ACTN1P12814 892 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 YWHABP31946 246 aaKnown RBP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 LTBRP36941 435 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 PLA2G5P39877 138 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 PPP1R2P41236 205 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 CHMP4BP1P59074 171 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 PRKCEQ02156 737 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 CYP4A11Q02928 519 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 FAM160A1Q05DH4 1040 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 NCBP1Q09161 790 aaKnown RBP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 MGAT3Q09327 533 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 TBC1D8BQ0IIM8 1120 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 ITGB3BPQ13352 177 aaPredicted RBP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 STIM1Q13586 685 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 TFDP1Q14186 410 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 PPP2R5AQ15172 486 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 ZNF484Q5JVG2 852 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 RESP18Q5W5W9 173 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 SWSAP1Q6NVH7 229 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 TAF2Q6P1X5 1199 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 ABHD15Q6UXT9 468 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 FAM43BQ6ZT52 329 aaPredicted RBP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 APBB1IPQ7Z5R6 666 aaPredicted RBP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 TRIM50Q86XT4 487 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 CCDC65Q8IXS2 484 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 CRIPAKQ8N1N5 446 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 DBF4BQ8NFT6 615 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 ATP8B4Q8TF62 1192 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 LINC01599Q8WXQ3 324 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 LARP4BQ92615 738 aaKnown RBP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 DHX58Q96C10 678 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 CEP170P1Q96L14 293 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 IFT74Q96LB3 600 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 SCLT1Q96NL6 688 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 MAP7D2Q96T17 732 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 RAD9AQ99638 391 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 FTOQ9C0B1 505 aaKnown RBP eCLIP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 TMEM60Q9H2L4 133 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 TNMDQ9H2S6 317 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 TUT1Q9H6E5 874 aaKnown RBP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 UBE2ZQ9H832 354 aaPredicted RBP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 C17orf75Q9HAS0 396 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 ATP6V0A4Q9HBG4 840 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 DACH1Q9UI36 760 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 FBXO2Q9UK22 296 aaPredicted RBP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 DBR1Q9UK59 544 aaKnown RBP5.31□□□□□ -1.56
SSBP3-213ENST00000530618 VAV3Q9UKW4 847 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 PCDHA7Q9UN72 937 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 COG5Q9UP83 839 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 KIAA1024Q9UPX6 916 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 ZDHHC9Q9Y397 364 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 MYO10Q9HD67 2058 aa5.31□□□□□ -1.56
SSBP3-213ENST00000530618 PLXNA3P51805 1871 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 DENND4AQ7Z401 1863 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 C17orf102A2RUQ5 167 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 POLR2DO15514 142 aaKnown RBP5.3□□□□□ -1.56
SSBP3-213ENST00000530618 ASAP2O43150 1006 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 ATP9AO75110 1047 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 CAND2O75155 1236 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 FAM13AO94988 1023 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 ATG7O95352 703 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 PARNO95453 639 aaKnown RBP5.3□□□□□ -1.56
SSBP3-213ENST00000530618 EYA4O95677 639 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 CHRNA1P02708 482 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 SLFN14P0C7P3 912 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 SMIM10L2AP0DMW4 78 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 SMIM10L2BP0DMW5 78 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 IL9P15248 144 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 PFKFB1P16118 471 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 PLCG1P19174 1290 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 MARK3P27448 753 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 MCM4P33991 863 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 SMTNP53814 917 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 PPFIA1Q13136 1202 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 DMP1Q13316 513 aaPredicted RBP5.3□□□□□ -1.56
SSBP3-213ENST00000530618 ALCAMQ13740 583 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 CAMK1Q14012 370 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 CTTNQ14247 550 aaKnown RBP5.3□□□□□ -1.56
SSBP3-213ENST00000530618 MXD4Q14582 209 aaPredicted RBP5.3□□□□□ -1.56
SSBP3-213ENST00000530618 TPRNQ4KMQ1 711 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 XKR9Q5GH70 373 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 FAM26DQ5JW98 314 aa5.3□□□□□ -1.56
SSBP3-213ENST00000530618 HYIQ5T013 277 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms