RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 AGO3Q9H9G7 860 aaKnown RBP6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 IFT122Q9HBG6 1241 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 ERVK-5Q9HDB9 667 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 GPRC5CQ9NQ84 441 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 KCND2Q9NZV8 630 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 CHMP5Q9NZZ3 219 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 CXXC1Q9P0U4 656 aaPredicted RBP6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 CCDC39Q9UFE4 941 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 PADI3Q9ULW8 664 aa6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 NOC2LQ9Y3T9 749 aaKnown RBP6.29□□□□□ -1.4
RPUSD4-204ENST00000530036 PDCD11Q14690 1871 aaKnown RBP6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 COL6A3P12111 3177 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 A0A087WZ62 844 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 ABHD14A-ACY1A0A1B0GW23 586 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 A0A1W2PQ27 194 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 A0A1W2PQ64 194 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 A0A1W2PQD8 194 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 ASAP2O43150 1006 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 EFCAB14O75071 495 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 RPS6KA5O75582 802 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 FGBP02675 491 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 ACTN1P12814 892 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 NCLP19338 710 aaKnown RBP6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 CMA1P23946 247 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 CD52P31358 61 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 PHKA2P46019 1235 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 ZNF131P52739 623 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 PTENP60484 403 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 WDR5P61964 334 aaKnown RBP6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 POU5F1BQ06416 359 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 PAK2Q13177 524 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 MCM6Q14566 821 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 ARSHQ5FYA8 562 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 CDCA2Q69YH5 1023 aaPredicted RBP6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 CCDC73Q6ZRK6 1079 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 OTOP2Q7RTS6 562 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 RNF149Q8NC42 400 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 RASSF8Q8NHQ8 419 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 NLRP7Q8WX94 980 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 LINC01599Q8WXQ3 324 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 BSNDQ8WZ55 320 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 KIFAP3Q92845 792 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 ZNF668Q96K58 619 aaPredicted RBP6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 RNPC3Q96LT9 517 aaKnown RBP6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 DRC1Q96MC2 740 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 FDXACB1Q9BRP7 624 aaPredicted RBP6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 GCOM2Q9BZD3 368 aaPredicted RBP6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 TMX1Q9H3N1 280 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 CUEDC2Q9H467 287 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 MINDY3Q9H8M7 445 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 ODF2LQ9ULJ1 636 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 GINS2Q9Y248 185 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 HPSEQ9Y251 543 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 CITO14578 2027 aa6.28□□□□□ -1.4
RPUSD4-204ENST00000530036 ADGRA3Q8IWK6 1321 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 COL4A4P53420 1690 aaPredicted RBP6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 GPR182O15218 404 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 MGEA5O60502 916 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 HIP1RO75146 1068 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 CSDE1O75534 798 aaKnown RBP6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 PFKFB1P16118 471 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 SFPQP23246 707 aaKnown RBP eCLIP6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 STAT6P42226 847 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 NAMPTP43490 491 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 DEFB103AP81534 67 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 MBTD1Q05BQ5 628 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 IKBKEQ14164 716 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 TFDP1Q14186 410 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 DSC3Q14574 896 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 PPP2R5AQ15172 486 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 PCBP1Q15365 356 aaKnown RBP eCLIP6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 AMHR2Q16671 573 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 LRIT3Q3SXY7 679 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 ODR4Q5SWX8 454 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 FAM102BQ5T8I3 360 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 RRAGBQ5VZM2 374 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 FAM109BQ6ICB4 259 aaPredicted RBP6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 CLEC17AQ6ZS10 378 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 MAEAQ7L5Y9 396 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 SRGAP1Q7Z6B7 1085 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 GPBP1Q86WP2 473 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 CRIPAKQ8N1N5 446 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 PDILTQ8N807 584 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 TMEM87AQ8NBN3 555 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 KCNN1Q92952 543 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 DNAJC19Q96DA6 116 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 FAM122AQ96E09 287 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 LRCH3Q96II8 777 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 NLRP4Q96MN2 994 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 SCLT1Q96NL6 688 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 SLC9A7Q96T83 725 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 REEP2Q9BRK0 252 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 FTHL17Q9BXU8 183 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 INO80BQ9C086 356 aaPredicted RBP6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 CCDC113Q9H0I3 377 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 TSPYL2Q9H2G4 693 aaPredicted RBP6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 MTIF3Q9H2K0 278 aaKnown RBP6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 TNMDQ9H2S6 317 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 C17orf75Q9HAS0 396 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms