RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 ALKBH5Q6P6C2 394 aaKnown RBP9.08□□□□□ -0.96
CTNND1-221ENST00000529873 RSBN1LQ6PCB5 846 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-221ENST00000529873 NSUN6Q8TEA1 469 aaKnown RBP9.08□□□□□ -0.96
CTNND1-221ENST00000529873 ZC3H15Q8WU90 426 aaKnown RBP9.08□□□□□ -0.96
CTNND1-221ENST00000529873 CCDC138Q96M89 665 aa9.08□□□□□ -0.96
CTNND1-221ENST00000529873 DDX56Q9NY93 547 aaKnown RBP9.08□□□□□ -0.96
CTNND1-221ENST00000529873 DONSONQ9NYP3 566 aa9.08□□□□□ -0.96
CTNND1-221ENST00000529873 MAP3K7O43318 606 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 CTNND1O60716 968 aaKnown RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 IGKV5-2P06315 115 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 TTLL4Q14679 1199 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 BBS9Q3SYG4 887 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 FRA10AC1Q70Z53 315 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 SCYL3Q8IZE3 742 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 ENAHQ8N8S7 591 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 IFT43Q96FT9 208 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 CEP19Q96LK0 163 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 FAM49AQ9H0Q0 323 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 SAYSD1Q9NPB0 183 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 TOPORSQ9NS56 1045 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 LMCD1Q9NZU5 365 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 PACSIN2Q9UNF0 486 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 TRIM49BA6NDI0 452 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 LRRC53A6NM62 1247 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 CYP27B1O15528 508 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 NMT2O60551 498 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 PAPOLAP51003 745 aaKnown RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 VAMP7P51809 220 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 MAPK6Q16659 721 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 EPHA10Q5JZY3 1008 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 TMTC4Q5T4D3 741 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 XXYLT1Q8NBI6 393 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 CYP26B1Q9NR63 512 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 CNOT8Q9UFF9 292 aaKnown RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 IP6K2Q9UHH9 426 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 POTEB3A0JP26 581 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 SLC16A4O15374 487 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 P4HBP07237 508 aaKnown RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 PCYT1AP49585 367 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 KNOP1Q1ED39 458 aaKnown RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 POTEBQ6S5H4 581 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 KCTD17Q8N5Z5 321 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 OXER1Q8TDS5 423 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 ADAM22Q9P0K1 906 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 ANAPC7Q9UJX3 599 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 DENND3A2RUS2 1198 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 MAPK13O15264 365 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 GFAPP14136 432 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 PODNQ7Z5L7 613 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 FBXL13Q8NEE6 735 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 MAML1Q92585 1016 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 CEP95Q96GE4 821 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 WRNIP1Q96S55 665 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 FAM213AQ9BRX8 229 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 NUP85Q9BW27 656 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 ABCB6Q9NP58 842 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 DCP1AQ9NPI6 582 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 CLTCQ00610 1675 aaKnown RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 HUS1O60921 280 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 SERPINI2O75830 405 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 PRCPP42785 496 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 CACNB3P54284 484 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 FOXO4P98177 505 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 GFPT1Q06210 699 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 DRP2Q13474 957 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 KLHL38Q2WGJ6 581 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 THNSL1Q8IYQ7 743 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 PDIK1LQ8N165 341 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 SEL1LQ9UBV2 794 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 RRP15Q9Y3B9 282 aaKnown RBP9.07□□□□□ -0.96
CTNND1-221ENST00000529873 ZHX2Q9Y6X8 837 aa9.07□□□□□ -0.96
CTNND1-221ENST00000529873 DYTNA2CJ06 578 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 M0QYV0 167 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 CTIFO43310 598 aaKnown RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 HSPA4LO95757 839 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 AP3M2P53677 418 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 SEMA3FQ13275 785 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 KRT33BQ14525 404 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 EMBQ6PCB8 327 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 CRLF3Q8IUI8 442 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 ARMC2Q8NEN0 867 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 OLA1Q9NTK5 396 aaKnown RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 FGFR1OP2Q9NVK5 253 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 PXDNLA1KZ92 1463 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 REREQ9P2R6 1566 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 ZNF189O75820 626 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 DCTN3O75935 186 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 PRDX5P30044 214 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 CLCN6P51797 869 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 DYNC1I2Q13409 638 aaKnown RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 GPD1LQ8N335 351 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 TMEM35BQ8NCS4 154 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 GIPC2Q8TF65 315 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 PPWD1Q96BP3 646 aaKnown RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 MRPL4Q9BYD3 311 aaKnown RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 TDRD3Q9H7E2 651 aaKnown RBP9.06□□□□□ -0.96
CTNND1-221ENST00000529873 NFU1Q9UMS0 254 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 CCDC151A5D8V7 595 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 CASP8Q14790 479 aa9.06□□□□□ -0.96
CTNND1-221ENST00000529873 DHX40Q8IX18 779 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms