RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 CATSPEREQ5SY80 951 aa6.57□□□□□ -1.36
CSDE1-212ENST00000529046 BTBD8Q5XKL5 378 aa6.57□□□□□ -1.36
CSDE1-212ENST00000529046 CPZQ66K79 652 aa6.57□□□□□ -1.36
CSDE1-212ENST00000529046 NXPE1Q8N323 547 aa6.57□□□□□ -1.36
CSDE1-212ENST00000529046 PCDH12Q9NPG4 1184 aa6.57□□□□□ -1.36
CSDE1-212ENST00000529046 RPRD2Q5VT52 1461 aaKnown RBP6.57□□□□□ -1.36
CSDE1-212ENST00000529046 SYNMO15061 1565 aa6.57□□□□□ -1.36
CSDE1-212ENST00000529046 CROCC2H7BZ55 1655 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 TGM5O43548 720 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 BRINP1O60477 761 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 PLATP00750 562 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 AOAHP28039 575 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 HSPA1LP34931 641 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 SCNN1BP51168 640 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 PHC1P78364 1004 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 EFEMP1Q12805 493 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 PTPROQ16827 1216 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 SKIDA1Q1XH10 827 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 SPATS1Q496A3 300 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 PHF19Q5T6S3 580 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 GPR158Q5T848 1215 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 CD276Q5ZPR3 534 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 PLEKHH3Q7Z736 793 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 UBR7Q8N806 425 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 FOXRED1Q96CU9 486 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-212ENST00000529046 C16orf92Q96LL3 132 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 IFT22Q9H7X7 185 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 ACSS2Q9NR19 701 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 ZKSCAN5Q9Y2L8 839 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 COL4A3BPQ9Y5P4 624 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 ALKQ9UM73 1620 aa6.56□□□□□ -1.36
CSDE1-212ENST00000529046 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-212ENST00000529046 H7C1D1 291 aa6.55□□□□□ -1.36
CSDE1-212ENST00000529046 SCDO00767 359 aa6.55□□□□□ -1.36
CSDE1-212ENST00000529046 GAS7O60861 476 aa6.55□□□□□ -1.36
CSDE1-212ENST00000529046 FBXO21O94952 628 aa6.55□□□□□ -1.36
CSDE1-212ENST00000529046 MPIG6BO95866 241 aa6.55□□□□□ -1.36
CSDE1-212ENST00000529046 CYP17A1P05093 508 aa6.55□□□□□ -1.36
CSDE1-212ENST00000529046 ITGB3P05106 788 aa6.55□□□□□ -1.36
CSDE1-212ENST00000529046 ENO2P09104 434 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-212ENST00000529046 SMAD3P84022 425 aaKnown RBP6.55□□□□□ -1.36
CSDE1-212ENST00000529046 SMAD2Q15796 467 aaKnown RBP6.55□□□□□ -1.36
CSDE1-212ENST00000529046 TBC1D10BQ4KMP7 808 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-212ENST00000529046 CHTF18Q8WVB6 975 aa6.55□□□□□ -1.36
CSDE1-212ENST00000529046 SCYL1Q96KG9 808 aa6.55□□□□□ -1.36
CSDE1-212ENST00000529046 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
CSDE1-212ENST00000529046 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.55□□□□□ -1.36
CSDE1-212ENST00000529046 FAM135BQ49AJ0 1406 aa6.55□□□□□ -1.36
CSDE1-212ENST00000529046 TET3O43151 1660 aa6.55□□□□□ -1.36
CSDE1-212ENST00000529046 CEP152O94986 1710 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ANKRD50Q9ULJ7 1429 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 NCOA3Q9Y6Q9 1424 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ZNF839A8K0R7 811 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 NEMP1O14524 444 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 B4GALT3O60512 393 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 FKBP9O95302 570 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ADRB1P08588 477 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 COL6A1P12109 1028 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 GLRBP48167 497 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 PFKPQ01813 784 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 OCRLQ01968 901 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 LRRC32Q14392 662 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 EPHA7Q15375 998 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 SURF1Q15526 300 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ZNF827Q17R98 1081 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 EP400NLQ6ZTU2 488 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 FKBP9P1Q75LS8 142 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 RTN4RL1Q86UN2 441 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-212ENST00000529046 KLHL36Q8N4N3 616 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 KIAA1958Q8N8K9 716 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ZCRB1Q8TBF4 217 aaKnown RBP6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ASB15Q8WXK1 588 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 MBD6Q96DN6 1003 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ELF4Q99607 663 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-212ENST00000529046 BARX1Q9HBU1 254 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-212ENST00000529046 EMC7Q9NPA0 242 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 SPTLC3Q9NUV7 552 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 RIC8BQ9NVN3 520 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 H2AFY2Q9P0M6 372 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ARHGAP20Q9P2F6 1191 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ZFP69BQ9UJL9 534 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 APOBEC2Q9Y235 224 aaKnown RBP6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ATP8A1Q9Y2Q0 1164 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ASB1Q9Y576 335 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 EFCAB6Q5THR3 1501 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ROCK1Q13464 1354 aa6.54□□□□□ -1.36
CSDE1-212ENST00000529046 ZNF536O15090 1300 aa6.53□□□□□ -1.36
CSDE1-212ENST00000529046 K7ESF4 209 aa6.53□□□□□ -1.36
CSDE1-212ENST00000529046 GPR39O43194 453 aa6.53□□□□□ -1.36
CSDE1-212ENST00000529046 HIP1RO75146 1068 aa6.53□□□□□ -1.36
CSDE1-212ENST00000529046 MAFO75444 373 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-212ENST00000529046 CHGBP05060 677 aa6.53□□□□□ -1.36
CSDE1-212ENST00000529046 NCLP19338 710 aaKnown RBP6.53□□□□□ -1.36
CSDE1-212ENST00000529046 NFKB2Q00653 900 aa6.53□□□□□ -1.36
CSDE1-212ENST00000529046 ESRP1Q6NXG1 681 aaKnown RBP6.53□□□□□ -1.36
CSDE1-212ENST00000529046 RBM15Q96T37 977 aaKnown RBP eCLIP6.53□□□□□ -1.363e-7■■■■□ 23.4
CSDE1-212ENST00000529046 TTC1Q99614 292 aa6.53□□□□□ -1.36
CSDE1-212ENST00000529046 ZMAT4Q9H898 229 aa6.53□□□□□ -1.36
CSDE1-212ENST00000529046 THG1LQ9NWX6 298 aaKnown RBP6.53□□□□□ -1.36
CSDE1-212ENST00000529046 NOP58Q9Y2X3 529 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms