RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 LGALS4P56470 323 aa7.87□□□□□ -1.15
PCF11-202ENST00000528336 IGBP1P78318 339 aa7.87□□□□□ -1.15
PCF11-202ENST00000528336 TRIM25Q14258 630 aaKnown RBP7.87□□□□□ -1.15
PCF11-202ENST00000528336 FSCN1Q16658 493 aaKnown RBP7.87□□□□□ -1.15
PCF11-202ENST00000528336 RNF151Q2KHN1 245 aa7.87□□□□□ -1.15
PCF11-202ENST00000528336 CDYL2Q8N8U2 506 aa7.87□□□□□ -1.15
PCF11-202ENST00000528336 OR14K1Q8NGZ2 314 aa7.87□□□□□ -1.15
PCF11-202ENST00000528336 MTMR8Q96EF0 704 aa7.87□□□□□ -1.15
PCF11-202ENST00000528336 PTPN18Q99952 460 aa7.87□□□□□ -1.15
PCF11-202ENST00000528336 OR10A2Q9H208 303 aa7.87□□□□□ -1.15
PCF11-202ENST00000528336 KCTD10Q9H3F6 313 aa7.87□□□□□ -1.15
PCF11-202ENST00000528336 VWA7Q9Y334 891 aa7.87□□□□□ -1.15
PCF11-202ENST00000528336 SLC4A7Q9Y6M7 1214 aa7.87□□□□□ -1.15
PCF11-202ENST00000528336 A0A0A6YYK5 440 aaPredicted RBP7.86□□□□□ -1.15
PCF11-202ENST00000528336 A0A0G2JLL6 359 aaPredicted RBP7.86□□□□□ -1.15
PCF11-202ENST00000528336 ALG1L2C9J202 215 aa7.86□□□□□ -1.15
PCF11-202ENST00000528336 H2AFYO75367 372 aaKnown RBP7.86□□□□□ -1.15
PCF11-202ENST00000528336 XPAP23025 273 aaPredicted RBP7.86□□□□□ -1.15
PCF11-202ENST00000528336 SESN2P58004 480 aaPredicted RBP7.86□□□□□ -1.15
PCF11-202ENST00000528336 MTMR1Q13613 665 aa7.86□□□□□ -1.15
PCF11-202ENST00000528336 ACAP1Q15027 740 aa7.86□□□□□ -1.15
PCF11-202ENST00000528336 ZNF827Q17R98 1081 aa7.86□□□□□ -1.15
PCF11-202ENST00000528336 USP30Q70CQ3 517 aa7.86□□□□□ -1.15
PCF11-202ENST00000528336 LYSMD2Q8IV50 215 aa7.86□□□□□ -1.15
PCF11-202ENST00000528336 NKD2Q969F2 451 aaPredicted RBP7.86□□□□□ -1.15
PCF11-202ENST00000528336 GFM2Q969S9 779 aaKnown RBP7.86□□□□□ -1.15
PCF11-202ENST00000528336 C20orf173Q96LM9 149 aa7.86□□□□□ -1.15
PCF11-202ENST00000528336 TEPSINQ96N21 525 aa7.86□□□□□ -1.15
PCF11-202ENST00000528336 LRRC37BQ96QE4 947 aa7.86□□□□□ -1.15
PCF11-202ENST00000528336 SOX7Q9BT81 388 aa7.86□□□□□ -1.15
PCF11-202ENST00000528336 QRSL1Q9H0R6 528 aaKnown RBP7.86□□□□□ -1.15
PCF11-202ENST00000528336 WNT8AQ9H1J5 351 aa7.86□□□□□ -1.15
PCF11-202ENST00000528336 PRSS50Q9UI38 385 aa7.86□□□□□ -1.15
PCF11-202ENST00000528336 RBM8AQ9Y5S9 174 aaKnown RBP7.86□□□□□ -1.15
PCF11-202ENST00000528336 WASHC2AQ641Q2 1341 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 ARHGAP6O43182 974 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 DAPK3O43293 454 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 LAMTOR5O43504 91 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 CNOT4O95628 575 aaKnown RBP7.85□□□□□ -1.15
PCF11-202ENST00000528336 ERVK-21P61565 698 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 SURF1Q15526 300 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.85□□□□□ -1.15
PCF11-202ENST00000528336 TBC1D10BQ4KMP7 808 aaPredicted RBP7.85□□□□□ -1.15
PCF11-202ENST00000528336 TOR2AQ5JU69 321 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 ZFYVE27Q5T4F4 411 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 GAREM2Q75VX8 874 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 RPUSD2Q8IZ73 545 aaKnown RBP7.85□□□□□ -1.15
PCF11-202ENST00000528336 GCDHQ92947 438 aaPredicted RBP7.85□□□□□ -1.15
PCF11-202ENST00000528336 HAPLN2Q9GZV7 340 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 C12orf65Q9H3J6 166 aaKnown RBP7.85□□□□□ -1.15
PCF11-202ENST00000528336 HOMER2Q9NSB8 354 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 DPP7Q9UHL4 492 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 TRHDEQ9UKU6 1024 aa7.85□□□□□ -1.15
PCF11-202ENST00000528336 ARID1BQ8NFD5 2236 aaPredicted RBP7.84□□□□□ -1.15
PCF11-202ENST00000528336 WASHC2CQ9Y4E1 1318 aa7.84□□□□□ -1.15
PCF11-202ENST00000528336 C2orf78A6NCI8 922 aa7.84□□□□□ -1.15
PCF11-202ENST00000528336 GPR3P46089 330 aa7.84□□□□□ -1.15
PCF11-202ENST00000528336 RAC3P60763 192 aa7.84□□□□□ -1.15
PCF11-202ENST00000528336 ATP2C1P98194 919 aaPredicted RBP7.84□□□□□ -1.15
PCF11-202ENST00000528336 CDK17Q00537 523 aa7.84□□□□□ -1.15
PCF11-202ENST00000528336 KLF1Q13351 362 aaPredicted RBP7.84□□□□□ -1.15
PCF11-202ENST00000528336 NFIXQ14938 502 aa7.84□□□□□ -1.15
PCF11-202ENST00000528336 OR14C36Q8NHC7 312 aa7.84□□□□□ -1.15
PCF11-202ENST00000528336 LMF1Q96S06 567 aa7.84□□□□□ -1.15
PCF11-202ENST00000528336 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.84□□□□□ -1.15
PCF11-202ENST00000528336 CTDP1Q9Y5B0 961 aaPredicted RBP7.84□□□□□ -1.15
PCF11-202ENST00000528336 NPEPPSL1A6NEC2 478 aa7.83□□□□□ -1.16
PCF11-202ENST00000528336 FSBPO95073 299 aa7.83□□□□□ -1.16
PCF11-202ENST00000528336 EPHB4P54760 987 aa7.83□□□□□ -1.16
PCF11-202ENST00000528336 CCT2P78371 535 aaKnown RBP7.83□□□□□ -1.16
PCF11-202ENST00000528336 SRSF2Q01130 221 aaKnown RBP7.83□□□□□ -1.16
PCF11-202ENST00000528336 CD69Q07108 199 aa7.83□□□□□ -1.16
PCF11-202ENST00000528336 MAN2A1Q16706 1144 aa7.83□□□□□ -1.16
PCF11-202ENST00000528336 SYDE2Q5VT97 1194 aa7.83□□□□□ -1.16
PCF11-202ENST00000528336 PLA2G15Q8NCC3 412 aa7.83□□□□□ -1.16
PCF11-202ENST00000528336 RSAD2Q8WXG1 361 aa7.83□□□□□ -1.16
PCF11-202ENST00000528336 NEIL1Q96FI4 390 aaPredicted RBP7.83□□□□□ -1.16
PCF11-202ENST00000528336 RAX2Q96IS3 184 aa7.83□□□□□ -1.16
PCF11-202ENST00000528336 FDXACB1Q9BRP7 624 aaPredicted RBP7.83□□□□□ -1.16
PCF11-202ENST00000528336 OSBPL6Q9BZF3 934 aa7.83□□□□□ -1.16
PCF11-202ENST00000528336 DNAJC28Q9NX36 388 aa7.83□□□□□ -1.16
PCF11-202ENST00000528336 RTEL1Q9NZ71 1219 aa7.83□□□□□ -1.16
PCF11-202ENST00000528336 EVLQ9UI08 416 aaPredicted RBP7.83□□□□□ -1.16
PCF11-202ENST00000528336 K7ESF4 209 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 NRP2O60462 931 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 MT-CO1P00395 513 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 PLATP00750 562 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 MYBL2P10244 700 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 IARSP41252 1262 aaKnown RBP7.82□□□□□ -1.16
PCF11-202ENST00000528336 GPR15P49685 360 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 CTSWP56202 376 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 MGAT5Q09328 741 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 ABCB5Q2M3G0 1257 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 PGM2L1Q6PCE3 622 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 LMBR1LQ6UX01 489 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 LIMS2Q7Z4I7 341 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 CLEC14AQ86T13 490 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 SLC41A1Q8IVJ1 513 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 RPL10LQ96L21 214 aaKnown RBP7.82□□□□□ -1.16
PCF11-202ENST00000528336 GNRHR2Q96P88 292 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms