RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 RARRES1P49788 294 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 POU5F1BQ06416 359 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 PTGDRQ13258 359 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 MXD4Q14582 209 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 LARP1BQ659C4 914 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 MCTP1Q6DN14 999 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 FERMT3Q86UX7 667 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 KSR1Q8IVT5 923 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 ATXN2LQ8WWM7 1075 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 PRPF31Q8WWY3 499 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 P2RX5Q93086 422 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 TMEM143Q96AN5 459 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 MRPL38Q96DV4 380 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 NLRP4Q96MN2 994 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 C11orf84Q9BUA3 381 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 RAB34Q9BZG1 259 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 LMAN2LQ9H0V9 348 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 ATP6V0A4Q9HBG4 840 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 IFT122Q9HBG6 1241 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 DBR1Q9UK59 544 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 PCDHB6Q9Y5E3 794 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 MED24O75448 989 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 SKIP12755 728 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 CTNNB1P35222 781 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 LAMTOR4Q0VGL1 99 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 NBR1Q14596 966 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 PCBP1Q15365 356 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 HAUS3Q68CZ6 603 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 ECHDC2Q86YB7 292 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 MICALL1Q8N3F8 863 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 PIGOQ8TEQ8 1089 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 RSPH1Q8WYR4 309 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 CCDC43Q96MW1 224 aaKnown RBP13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 XPNPEP1Q9NQW7 623 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 THEGQ9P2T0 379 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 COG5Q9UP83 839 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 MRPL42Q9Y6G3 142 aaKnown RBP13.49□□□□□ -0.25
TRAPPC4-209ENST00000528230 CSDE1O75534 798 aaKnown RBP13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 SRGAP2CP0DJJ0 459 aa13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 FGFR4P22455 802 aa13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 ARL2P36404 184 aa13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 TFDP1Q14186 410 aa13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 FAM102BQ5T8I3 360 aa13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 CATSPER4Q7RTX7 472 aa13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 IFNLR1Q8IU57 520 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 IGSF22Q8N9C0 903 aa13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 TMEM117Q9H0C3 514 aa13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 PRDM6Q9NQX0 595 aa13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 AAASQ9NRG9 546 aa13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 LRWD1Q9UFC0 647 aa13.48□□□□□ -0.25
TRAPPC4-209ENST00000528230 TRANK1O15050 2925 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 TBKBP1A7MCY6 615 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 ZNF623O75123 536 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 PDCP20941 246 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 PHKA2P46019 1235 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 GATMP50440 423 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 PTENP60484 403 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 MRPS5P82675 430 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 PAN2Q504Q3 1202 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 TIGD5Q53EQ6 642 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 DTHD1Q6ZMT9 781 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 ZNF598Q86UK7 904 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 RNF149Q8NC42 400 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 MCPH1Q8NEM0 835 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 INTS4Q96HW7 963 aaKnown RBP13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 NFKBIZQ9BYH8 718 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 BMP2KQ9NSY1 1161 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 AGPAT5Q9NUQ2 364 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 PLAGL2Q9UPG8 496 aa13.47□□□□□ -0.25
TRAPPC4-209ENST00000528230 A0A087WWV3 80 aa13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 AXLP30530 894 aa13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 CCT6AP40227 531 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 RAB27AP51159 221 aa13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 ATP2C1P98194 919 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 SKIV2LQ15477 1246 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 CSPP1Q1MSJ5 1256 aa13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 AAK1Q2M2I8 961 aa13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 ARL6IP4Q66PJ3 421 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 TWF2Q6IBS0 349 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 BRAPQ7Z569 592 aa13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 ABI1Q8IZP0 508 aa13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 SYMPKQ92797 1274 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 CASD1Q96PB1 797 aa13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 ASB2Q96Q27 587 aa13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 MINDY3Q9H8M7 445 aa13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 RNF19AQ9NV58 838 aa13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 PIN4Q9Y237 131 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 PCDHB12Q9Y5F1 795 aa13.46□□□□□ -0.25
TRAPPC4-209ENST00000528230 ATG2AQ2TAZ0 1938 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 ARHGEF35A5YM69 484 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 DLL1O00548 723 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 GRM6O15303 877 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 USO1O60763 962 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 FGFR1P11362 822 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 CYP11B2P19099 503 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 IBSPP21815 317 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 GLRA2P23416 452 aa13.45□□□□□ -0.26
TRAPPC4-209ENST00000528230 HOXA11P31270 313 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms