RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 ASTN2O75129 1339 aaPredicted RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 COL2A1P02458 1487 aaPredicted RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 A0A1W2PQU0 124 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 CHURC1-FNTBB4DL54 471 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 ALG1L2C9J202 215 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 H3BQV1 296 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 MPHOSPH10O00566 681 aaKnown RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 PEX14O75381 377 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 CYP11A1P05108 521 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 HLA-DOAP06340 250 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 CTSBP07858 339 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 AKR1B1P15121 316 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 COL8A1P27658 744 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 GUCY1A2P33402 732 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 SHMT1P34896 483 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 GMPSP49915 693 aaPredicted RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 NFKB2Q00653 900 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 GABPAQ06546 454 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 C19orf57Q0VDD7 668 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 TROAPQ12815 778 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 RESTQ13127 1097 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 TNIP1Q15025 636 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 POU4F3Q15319 338 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 NBPF9Q3BBW0 867 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 GNPTABQ3T906 1256 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 FNDC3BQ53EP0 1204 aaKnown RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 FAM209AQ5JX71 171 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 PSAPL1Q6NUJ1 521 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 FAM173BQ6P4H8 233 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 CPLX2Q6PUV4 134 aaKnown RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 KRBA2Q6ZNG9 492 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 TSHZ1Q6ZSZ6 1077 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 CATIPQ7Z7H3 387 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 CACTIN-AS1Q8N1I8 211 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 AFAP1L2Q8N4X5 818 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 CRACR2BQ8N4Y2 399 aaPredicted RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 FANCBQ8NB91 859 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 PIBF1Q8WXW3 757 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 ELMO3Q96BJ8 720 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 TRIM11Q96F44 468 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 WDR89Q96FK6 387 aaPredicted RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 CEP95Q96GE4 821 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 SCARF2Q96GP6 870 aaPredicted RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 ZBED3Q96IU2 234 aaPredicted RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 C8orf76Q96K31 380 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 CORO1BQ9BR76 489 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 MTA3Q9BTC8 594 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 DHRS4Q9BTZ2 278 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 IDI2Q9BXS1 227 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 DNAJC18Q9H819 358 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 KAT14Q9H8E8 782 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 MYOZ2Q9NPC6 264 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 GEMIN8Q9NWZ8 242 aaKnown RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 TMOD2Q9NZR1 351 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 SUSD2Q9UGT4 822 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 KLHL3Q9UH77 587 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 SERPINB13Q9UIV8 391 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 MCM8Q9UJA3 840 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 ADAM30Q9UKF2 790 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 STX8Q9UNK0 236 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 CNPY2Q9Y2B0 182 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 MRPS23Q9Y3D9 190 aaKnown RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 TRIP12Q14669 1992 aaPredicted RBP4.76□□□□□ -1.65
CD44-226ENST00000527889 ARID2Q68CP9 1835 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 ATRNL1Q5VV63 1379 aa4.76□□□□□ -1.65
CD44-226ENST00000527889 hCG_1642624A0A1W2PR95 340 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 DCDC2CA8MYV0 355 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 M0R082 166 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 FZD9O00144 591 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 WNT10BO00744 389 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 FIBPO43427 364 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 DHX16O60231 1041 aaKnown RBP4.75□□□□□ -1.65
CD44-226ENST00000527889 EIF4EBP3O60516 100 aaPredicted RBP4.75□□□□□ -1.65
CD44-226ENST00000527889 CDKL5O76039 1030 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 GDF11O95390 407 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 PGRP06401 933 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 IFNAR1P17181 557 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 LIG1P18858 919 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 MAOBP27338 520 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 CDC25BP30305 580 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 POLR2BP30876 1174 aaKnown RBP4.75□□□□□ -1.65
CD44-226ENST00000527889 CCNFP41002 786 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 KIF4BQ2VIQ3 1234 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 TBC1D10BQ4KMP7 808 aaPredicted RBP4.75□□□□□ -1.65
CD44-226ENST00000527889 CCDC178Q5BJE1 867 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 CT47A1Q5JQC4 288 aaPredicted RBP4.75□□□□□ -1.65
CD44-226ENST00000527889 ZFYVE27Q5T4F4 411 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 YOD1Q5VVQ6 348 aaPredicted RBP4.75□□□□□ -1.65
CD44-226ENST00000527889 CLEC17AQ6ZS10 378 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 TMTC3Q6ZXV5 915 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 NBPF11Q86T75 865 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 NME8Q8N427 588 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 BEND7Q8N7W2 519 aaPredicted RBP4.75□□□□□ -1.65
CD44-226ENST00000527889 CTCFLQ8NI51 663 aaPredicted RBP4.75□□□□□ -1.65
CD44-226ENST00000527889 ZNF417Q8TAU3 575 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 SLC7A3Q8WY07 619 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 WNT8BQ93098 351 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 ACSF2Q96CM8 615 aaPredicted RBP4.75□□□□□ -1.65
CD44-226ENST00000527889 C8orf48Q96LL4 319 aa4.75□□□□□ -1.65
CD44-226ENST00000527889 ZNF587Q96SQ5 575 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms