RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 EXOC8Q8IYI6 725 aa21.55■■□□□ 1.04
CAPN1-211ENST00000527739 SPPL3Q8TCT6 385 aa21.55■■□□□ 1.04
CAPN1-211ENST00000527739 MICAL1Q8TDZ2 1067 aa21.55■■□□□ 1.04
CAPN1-211ENST00000527739 TMEM143Q96AN5 459 aa21.55■■□□□ 1.04
CAPN1-211ENST00000527739 EIF2AK1Q9BQI3 630 aaKnown RBP21.55■■□□□ 1.04
CAPN1-211ENST00000527739 SH2B1Q9NRF2 756 aaPredicted RBP21.55■■□□□ 1.04
CAPN1-211ENST00000527739 CLDND1Q9NY35 253 aa21.55■■□□□ 1.04
CAPN1-211ENST00000527739 PI4K2BG5E9Z4 385 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 WNT7AO00755 349 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 ZBTB39O15060 712 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 HOXA2O43364 376 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 GPR37L1O60883 481 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 SRGAP2CP0DJJ0 459 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 SPIRE1Q08AE8 756 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 PTCRAQ6ISU1 281 aaPredicted RBP21.54■■□□□ 1.04
CAPN1-211ENST00000527739 CATSPER4Q7RTX7 472 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 ZNF410Q86VK4 478 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 THNSL1Q8IYQ7 743 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 POF1BQ8WVV4 589 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 KIF2CQ99661 725 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 TMEM117Q9H0C3 514 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 DACT1Q9NYF0 836 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 HCSTQ9UBK5 93 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 NLRC5Q86WI3 1866 aa21.54■■□□□ 1.04
CAPN1-211ENST00000527739 SLITRK3O94933 977 aa21.53■■□□□ 1.04
CAPN1-211ENST00000527739 DNAJB1P25685 340 aa21.53■■□□□ 1.04
CAPN1-211ENST00000527739 RFC5P40937 340 aa21.53■■□□□ 1.04
CAPN1-211ENST00000527739 HMGN5P82970 282 aaKnown RBP21.53■■□□□ 1.04
CAPN1-211ENST00000527739 GJD3Q8N144 294 aa21.53■■□□□ 1.04
CAPN1-211ENST00000527739 NEK9Q8TD19 979 aa21.53■■□□□ 1.04
CAPN1-211ENST00000527739 PRPF31Q8WWY3 499 aaKnown RBP21.53■■□□□ 1.04
CAPN1-211ENST00000527739 PABPC5Q96DU9 382 aaKnown RBP21.53■■□□□ 1.04
CAPN1-211ENST00000527739 CCDC43Q96MW1 224 aaKnown RBP21.53■■□□□ 1.04
CAPN1-211ENST00000527739 PIN4Q9Y237 131 aaKnown RBP21.53■■□□□ 1.04
CAPN1-211ENST00000527739 COL4A3BPQ9Y5P4 624 aa21.53■■□□□ 1.04
CAPN1-211ENST00000527739 GRXCR2A6NFK2 248 aa21.52■■□□□ 1.04
CAPN1-211ENST00000527739 ZNF174Q15697 407 aa21.52■■□□□ 1.04
CAPN1-211ENST00000527739 LONRF3Q496Y0 759 aa21.52■■□□□ 1.04
CAPN1-211ENST00000527739 TWF2Q6IBS0 349 aaKnown RBP21.52■■□□□ 1.04
CAPN1-211ENST00000527739 PSPC1Q8WXF1 523 aaKnown RBP21.52■■□□□ 1.04
CAPN1-211ENST00000527739 PPP2R3CQ969Q6 453 aa21.52■■□□□ 1.04
CAPN1-211ENST00000527739 CASD1Q96PB1 797 aa21.52■■□□□ 1.04
CAPN1-211ENST00000527739 DHX33Q9H6R0 707 aaKnown RBP21.52■■□□□ 1.04
CAPN1-211ENST00000527739 UPF2Q9HAU5 1272 aaKnown RBP21.52■■□□□ 1.04
CAPN1-211ENST00000527739 CHST12Q9NRB3 414 aa21.52■■□□□ 1.04
CAPN1-211ENST00000527739 PPME1Q9Y570 386 aa21.52■■□□□ 1.04
CAPN1-211ENST00000527739 A0A0U1RQF3 1178 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 NCK2O43639 380 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 IRS1P35568 1242 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 HYAL1Q12794 435 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 CAMK1Q14012 370 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 EMC2Q15006 297 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 COLGALT1Q8NBJ5 622 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 HELQQ8TDG4 1101 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 TCP11Q8WWU5 503 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 TMEM60Q9H2L4 133 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 HCN4Q9Y3Q4 1203 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 ATG2AQ2TAZ0 1938 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 LOXHD1Q8IVV2 1947 aa21.51■■□□□ 1.03
CAPN1-211ENST00000527739 A0A087WWV3 80 aa21.5■■□□□ 1.03
CAPN1-211ENST00000527739 FGF18O76093 207 aa21.5■■□□□ 1.03
CAPN1-211ENST00000527739 EOMESO95936 686 aa21.5■■□□□ 1.03
CAPN1-211ENST00000527739 LAG3P18627 525 aa21.5■■□□□ 1.03
CAPN1-211ENST00000527739 SSTR3P32745 418 aaPredicted RBP21.5■■□□□ 1.03
CAPN1-211ENST00000527739 GTF2F1P35269 517 aaKnown RBP eCLIP21.5■■□□□ 1.034e-13■■■■□ 21.8
CAPN1-211ENST00000527739 RBM25P49756 843 aaKnown RBP21.5■■□□□ 1.03
CAPN1-211ENST00000527739 LAMTOR4Q0VGL1 99 aa21.5■■□□□ 1.03
CAPN1-211ENST00000527739 RBM23Q86U06 439 aaKnown RBP21.5■■□□□ 1.03
CAPN1-211ENST00000527739 MTMR9Q96QG7 549 aa21.5■■□□□ 1.03
CAPN1-211ENST00000527739 MTRQ99707 1265 aa21.5■■□□□ 1.03
CAPN1-211ENST00000527739 HSD17B14Q9BPX1 270 aa21.5■■□□□ 1.03
CAPN1-211ENST00000527739 FOXP1Q9H334 677 aaPredicted RBP21.5■■□□□ 1.03
CAPN1-211ENST00000527739 CWH43Q9H720 699 aa21.5■■□□□ 1.03
CAPN1-211ENST00000527739 RNF19AQ9NV58 838 aa21.5■■□□□ 1.03
CAPN1-211ENST00000527739 POTEMA6NI47 508 aa21.49■■□□□ 1.03
CAPN1-211ENST00000527739 ST18O60284 1047 aa21.49■■□□□ 1.03
CAPN1-211ENST00000527739 HOXD11P31277 338 aaPredicted RBP21.49■■□□□ 1.03
CAPN1-211ENST00000527739 RABEP1Q15276 862 aa21.49■■□□□ 1.03
CAPN1-211ENST00000527739 CLUL1Q15846 466 aa21.49■■□□□ 1.03
CAPN1-211ENST00000527739 LRRC55Q6ZSA7 311 aa21.49■■□□□ 1.03
CAPN1-211ENST00000527739 LRRC43Q8N309 656 aa21.49■■□□□ 1.03
CAPN1-211ENST00000527739 FBXO18Q8NFZ0 1043 aa21.49■■□□□ 1.03
CAPN1-211ENST00000527739 IFT122Q9HBG6 1241 aa21.49■■□□□ 1.03
CAPN1-211ENST00000527739 PCDHGC5Q9Y5F6 944 aa21.49■■□□□ 1.03
CAPN1-211ENST00000527739 RALGAPA2Q2PPJ7 1873 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 ASAP2O43150 1006 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 GAS2O43903 313 aaKnown RBP21.48■■□□□ 1.03
CAPN1-211ENST00000527739 SKIP12755 728 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 PBX3P40426 434 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 TECP42680 631 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 PHKA2P46019 1235 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 NRIP1P48552 1158 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 COL19A1Q14993 1142 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 CSPP1Q1MSJ5 1256 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 PUS10Q3MIT2 529 aaKnown RBP21.48■■□□□ 1.03
CAPN1-211ENST00000527739 CLLU1OSQ5K130 101 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 SRGAP1Q7Z6B7 1085 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 RNF149Q8NC42 400 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 PIGOQ8TEQ8 1089 aa21.48■■□□□ 1.03
CAPN1-211ENST00000527739 LPPQ93052 612 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms