RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 NCOA3Q9Y6Q9 1424 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 PLEKHG2Q9H7P9 1386 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 SPAG9O60271 1321 aaKnown RBP4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 TMEM191CA6NGB0 347 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 SCAMP3O14828 347 aaKnown RBP4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 KINO60870 393 aaKnown RBP4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 FAM163BP0C2L3 166 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 GNAT1P11488 350 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 TNNT1P13805 278 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 GRK2P25098 689 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 GJA4P35212 333 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 GRK3P35626 688 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 MAGEA9P43362 315 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 RWDD2BP57060 319 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 HHEXQ03014 270 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 ICA1Q05084 483 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 GRM7Q14831 915 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 SF3A1Q15459 793 aaKnown RBP4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 PDCD2Q16342 344 aaPredicted RBP4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 CSRP2Q16527 193 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 AP1ARQ63HQ0 302 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 ZNF280DQ6N043 979 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 USP30Q70CQ3 517 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 CENPQQ7L2Z9 268 aaPredicted RBP4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 SGMS1Q86VZ5 419 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 FMNL3Q8IVF7 1028 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 THEMISQ8N1K5 641 aaPredicted RBP4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 IQUBQ8NA54 791 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 KIF18AQ8NI77 898 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 EXOC6Q8TAG9 804 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 ZCRB1Q8TBF4 217 aaKnown RBP4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 PIBF1Q8WXW3 757 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 KCTD13Q8WZ19 329 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 ANAPC16Q96DE5 110 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 PHF20Q9BVI0 1012 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 KIAA1683Q9H0B3 1180 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 TMX4Q9H1E5 349 aaPredicted RBP4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 ZNF446Q9NWS9 450 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 CHCHD3Q9NX63 227 aaKnown RBP4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 SUN2Q9UH99 717 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 RB1CC1Q8TDY2 1594 aa4.31□□□□□ -1.72
CLNS1A-209ENST00000527299 RRBP1Q9P2E9 1410 aaKnown RBP4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 ERICH4A6NGS2 130 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 B2RBV5 119 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 CYP27B1O15528 508 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 HMGCRP04035 888 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 SKILP12757 684 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 PDE6AP16499 860 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 PEX19P40855 299 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 WDR72Q3MJ13 1102 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 CCDC30Q5VVM6 783 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 TRIM68Q6AZZ1 485 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 LAIR1Q6GTX8 287 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 LBX2Q6XYB7 198 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 MMS22LQ6ZRQ5 1243 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 CXXC5Q7LFL8 322 aaKnown RBP4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 SRLQ86TD4 932 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 EFCAB13Q8IY85 973 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 ACRBPQ8NEB7 543 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 AGAP3Q96P47 875 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 GBP4Q96PP9 640 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 KCNJ15Q99712 375 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 SLX1AQ9BQ83 275 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 TMX1Q9H3N1 280 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 VEZTQ9HBM0 779 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 A1CFQ9NQ94 594 aaKnown RBP4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 ABCF2Q9UG63 623 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 FBXO10Q9UK96 956 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 ABCC9O60706 1549 aa4.3□□□□□ -1.72
CLNS1A-209ENST00000527299 CGNL1Q0VF96 1302 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 PMS2P1A4D2B8 440 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 CAPN14A8MX76 684 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 DLX3O60479 287 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 CAND2O75155 1236 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 TPM1P09493 284 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 PROZP22891 400 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 KCNQ1P51787 676 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 GYS2P54840 703 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 PPP2R2AP63151 447 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 IL13RA1P78552 427 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 SLC25A3Q00325 362 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 HGFACQ04756 655 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 NEXNQ0ZGT2 675 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 RASA3Q14644 834 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 RRP1BQ14684 758 aaKnown RBP4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 BMS1Q14692 1282 aaKnown RBP4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 EIF4HQ15056 248 aaKnown RBP4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 KIZQ2M2Z5 673 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 SLC5A9Q2M3M2 681 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 TEX35Q5T0J7 233 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 TTLL5Q6EMB2 1281 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 MRM1Q6IN84 353 aaKnown RBP4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 SYT10Q6XYQ8 523 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 KRBA2Q6ZNG9 492 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 CLEC17AQ6ZS10 378 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 TRIM74Q86UV6 250 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 TRIM73Q86UV7 250 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 C10orf67Q8IYJ2 551 aa4.29□□□□□ -1.72
CLNS1A-209ENST00000527299 D2HGDHQ8N465 521 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms