RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 CUL4BQ13620 913 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 IKBKEQ14164 716 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 GSE1Q14687 1217 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 STX1AQ16623 288 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 PLEKHG4Q58EX7 1191 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 NT5DC1Q5TFE4 455 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 FAM160B1Q5W0V3 765 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 PPP2R2DQ66LE6 453 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 SWSAP1Q6NVH7 229 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 RUFY4Q6ZNE9 571 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 OTUD6AQ7L8S5 288 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 SYT2Q8N9I0 419 aaPredicted RBP14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 TRIML1Q8N9V2 468 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 USP38Q8NB14 1042 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 CCDC43Q96MW1 224 aaKnown RBP14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 MTRQ99707 1265 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 PRRC2BQ5JSZ5 2229 aaKnown RBP14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 A0A087WWV3 80 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 ARHGEF35A5YM69 484 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 BIN1O00499 593 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 CHRNA1P02708 482 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 RPN1P04843 607 aaKnown RBP14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 KRT18P05783 430 aaKnown RBP14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 MARK3P27448 753 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 KCNJ6P48051 423 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 SLC12A3P55017 1021 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 ASIC1P78348 528 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 PLPPR4Q7Z2D5 763 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 GPBP1Q86WP2 473 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 SPATA20Q8TB22 786 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 PIGOQ8TEQ8 1089 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 GLG1Q92896 1179 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 GAS2L1Q99501 681 aaPredicted RBP14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 FUCA2Q9BTY2 467 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 TRIM9Q9C026 710 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 BHMT2Q9H2M3 363 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 AZI2Q9H6S1 392 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 ZNF302Q9NR11 478 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 ANKEF1Q9NU02 776 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 DBR1Q9UK59 544 aaKnown RBP14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 MAN1B1Q9UKM7 699 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 SIP14410 1827 aa14.06□□□□□ -0.16
SSSCA1-203ENST00000526877 EPOPA6NHQ4 379 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 MYMKA6NI61 221 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 DLL1O00548 723 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 EFCAB14O75071 495 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 GJB5O95377 273 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 CAVIN2O95810 425 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 INSRRP14616 1297 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 CASP1P29466 404 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 YWHABP31946 246 aaKnown RBP14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 STAT5BP51692 787 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 PPFIA1Q13136 1202 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 PLCB4Q15147 1175 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 GRIK4Q16099 956 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 CNNM4Q6P4Q7 775 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 SPRED2Q7Z698 418 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 CCDC60Q8IWA6 550 aaPredicted RBP14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 DDX12PQ92771 950 aa14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 GTPBP4Q9BZE4 634 aaKnown RBP14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 NAT10Q9H0A0 1025 aaKnown RBP14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 WRAP73Q9P2S5 460 aaPredicted RBP14.05□□□□□ -0.16
SSSCA1-203ENST00000526877 MYH11P35749 1972 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 PVALEFA0A1B0GWK0 134 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 LCHNA4D1U4 455 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 RFXAPO00287 272 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 TLL1O43897 1013 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 CTSHP09668 335 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 CYP11B2P19099 503 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 POU3F3P20264 500 aaPredicted RBP14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 MGAT3Q09327 533 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 MORC3Q14149 939 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 KCNB1Q14721 858 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 UGCGQ16739 394 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 XKR3Q5GH77 459 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 ISM2Q6H9L7 571 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 TAF2Q6P1X5 1199 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 UNC13DQ70J99 1090 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 DYMQ7RTS9 669 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 CCDC65Q8IXS2 484 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 ZBTB10Q96DT7 871 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 NRBP2Q9NSY0 501 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 EXOC1Q9NV70 894 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 KCND2Q9NZV8 630 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 DACH1Q9UI36 760 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 MAFBQ9Y5Q3 323 aaPredicted RBP14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 IGSF9BQ9UPX0 1349 aa14.04□□□□□ -0.16
SSSCA1-203ENST00000526877 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 GOLGA6L3A6NEY3 463 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 RRN3P2A6NIE6 340 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 ZBTB39O15060 712 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 IDEP14735 1019 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 ATP4AP20648 1035 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 IGFBP4P22692 258 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 KMT5BQ4FZB7 885 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 ANO6Q4KMQ2 910 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 XKR9Q5GH70 373 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 RINT1Q6NUQ1 792 aa14.03□□□□□ -0.16
SSSCA1-203ENST00000526877 MLKLQ8NB16 471 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms