RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 SARSP49591 514 aaKnown RBP18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 FAM189BP81408 668 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 HYIQ5T013 277 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 SLC24A5Q71RS6 500 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 SRGAP1Q7Z6B7 1085 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 CABP7Q86V35 215 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 CRIPAKQ8N1N5 446 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 MCPH1Q8NEM0 835 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 ASAP3Q8TDY4 903 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 YME1L1Q96TA2 773 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 PLIN2Q99541 437 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 POLR3FQ9H1D9 316 aaPredicted RBP18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 CERS4Q9HA82 394 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 GPRC5CQ9NQ84 441 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 C1orf112Q9NSG2 853 aa18.02■□□□□ 0.48
SSSCA1-202ENST00000526433 C9IYK1 514 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 STAG3L1P0CL83 205 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 SFPQP23246 707 aaKnown RBP eCLIP18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 PTENP60484 403 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 GRB10Q13322 594 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 TFDP1Q14186 410 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 FAM102BQ5T8I3 360 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 CATSPER4Q7RTX7 472 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 KCNK18Q7Z418 384 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 NPAS4Q8IUM7 802 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 SP7Q8TDD2 431 aaPredicted RBP18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 CDK5RAP3Q96JB5 506 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 PRDM12Q9H4Q4 367 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 MINDY3Q9H8M7 445 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 POLD4Q9HCU8 107 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 TFIP11Q9UBB9 837 aaKnown RBP18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 LRFN2Q9ULH4 789 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 PCDHB7Q9Y5E2 793 aa18.01■□□□□ 0.47
SSSCA1-202ENST00000526433 LINC01553A4QN01 128 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 SLC26A4O43511 780 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 DGKIO75912 1065 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 F13A1P00488 732 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 PHKA2P46019 1235 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 POU5F1BQ06416 359 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 PKP1Q13835 747 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 CAPSQ13938 189 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 BECN1Q14457 450 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 SLC39A14Q15043 492 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 KCTD17Q8N5Z5 321 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 MYLIPQ8WY64 445 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 ZNF396Q96N95 335 aaPredicted RBP18■□□□□ 0.47
SSSCA1-202ENST00000526433 NT5C3AQ9H0P0 336 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 CHST12Q9NRB3 414 aa18■□□□□ 0.47
SSSCA1-202ENST00000526433 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
SSSCA1-202ENST00000526433 FBXO2Q9UK22 296 aaPredicted RBP18■□□□□ 0.47
SSSCA1-202ENST00000526433 SRPRBQ9Y5M8 271 aaKnown RBP18■□□□□ 0.47
SSSCA1-202ENST00000526433 SPRED2Q7Z698 418 aa17.99■□□□□ 0.47
SSSCA1-202ENST00000526433 ARNTL2Q8WYA1 636 aa17.99■□□□□ 0.47
SSSCA1-202ENST00000526433 ZNF689Q96CS4 500 aaPredicted RBP17.99■□□□□ 0.47
SSSCA1-202ENST00000526433 CALML4Q96GE6 196 aa17.99■□□□□ 0.47
SSSCA1-202ENST00000526433 CLIC6Q96NY7 704 aa17.99■□□□□ 0.47
SSSCA1-202ENST00000526433 CSRNP2Q9H175 543 aa17.99■□□□□ 0.47
SSSCA1-202ENST00000526433 CHD7Q9P2D1 2997 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 RFXAPO00287 272 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 NASPP49321 788 aaPredicted RBP17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 ERVK-21P61565 698 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 STK38Q15208 465 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 FOXD4L6Q3SYB3 417 aaPredicted RBP17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 TMEM119Q4V9L6 283 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 SPECC1Q5M775 1068 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 RINT1Q6NUQ1 792 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 FOXD4L3Q6VB84 417 aaPredicted RBP17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 IFNLR1Q8IU57 520 aaPredicted RBP17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 FIBCD1Q8N539 461 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 EPSTI1Q96J88 318 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 TGS1Q96RS0 853 aaKnown RBP17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 CCSER1Q9C0I3 900 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 ELAC1Q9H777 363 aaKnown RBP17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 RC3H2Q9HBD1 1191 aaKnown RBP17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 DACT1Q9NYF0 836 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 PIN4Q9Y237 131 aaKnown RBP17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 STXBP5LQ9Y2K9 1186 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 MORC2Q9Y6X9 1032 aaPredicted RBP17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 MYH15Q9Y2K3 1946 aa17.98■□□□□ 0.47
SSSCA1-202ENST00000526433 A0A0U1RQF3 1178 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 LRRIQ4A6NIV6 560 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 INO80B-WBP1J3KQ70 363 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 SSBP05455 408 aaKnown RBP eCLIP17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 GATMP50440 423 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 BTG3Q14201 252 aaPredicted RBP17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 TWF2Q6IBS0 349 aaKnown RBP17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 C1orf186Q6ZWK4 172 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 USP49Q70CQ1 688 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 ECHDC2Q86YB7 292 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 SYT2Q8N9I0 419 aaPredicted RBP17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 LINC00301Q8NCQ3 95 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 BSNDQ8WZ55 320 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 KIFAP3Q92845 792 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 RUSC1Q9BVN2 902 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 NFKBIZQ9BYH8 718 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 TMEM161AQ9NX61 479 aa17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 DAXXQ9UER7 740 aaPredicted RBP17.97■□□□□ 0.47
SSSCA1-202ENST00000526433 EPOPA6NHQ4 379 aa17.96■□□□□ 0.47
SSSCA1-202ENST00000526433 PLA2G4BP0C869 781 aa17.96■□□□□ 0.47
SSSCA1-202ENST00000526433 HOXA11P31270 313 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms