RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 STK33Q9BYT3 514 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 FHDC1Q9C0D6 1143 aaPredicted RBP17.38■□□□□ 0.37
USH1C-204ENST00000526313 MYH10P35580 1976 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 UTRNP46939 3433 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 ADM5C9JUS6 153 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 PMM2O15305 246 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 P4HA2O15460 535 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 SRGAP2O75044 1071 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 EIF3JO75822 258 aaKnown RBP17.37■□□□□ 0.37
USH1C-204ENST00000526313 ATG7O95352 703 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 RTP1P59025 263 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 ACTR2P61160 394 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 ARID5AQ03989 594 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 BRD3Q15059 726 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 SULF1Q8IWU6 871 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 CNKSR2Q8WXI2 1034 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 KIFAP3Q92845 792 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 NOX5Q96PH1 765 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 CBWD1Q9BRT8 395 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 BTBD7Q9P203 1132 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 FBXO40Q9UH90 709 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 CSADQ9Y600 493 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 ARID2Q68CP9 1835 aa17.37■□□□□ 0.37
USH1C-204ENST00000526313 A0A0G2JLL6 359 aaPredicted RBP17.36■□□□□ 0.37
USH1C-204ENST00000526313 CCDC151A5D8V7 595 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 TISP43B9A030 160 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 IRF6O14896 467 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 SLC16A4O15374 487 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 FERP16591 822 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 NPTX2P47972 431 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 PPATQ06203 517 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 STXBP2Q15833 593 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 C1orf220Q5T0J3 134 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 FAM102BQ5T8I3 360 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 SWSAP1Q6NVH7 229 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 CC2D1AQ6P1N0 951 aaPredicted RBP17.36■□□□□ 0.37
USH1C-204ENST00000526313 ZNF572Q7Z3I7 529 aaPredicted RBP17.36■□□□□ 0.37
USH1C-204ENST00000526313 PRRT2Q7Z6L0 340 aaPredicted RBP17.36■□□□□ 0.37
USH1C-204ENST00000526313 XXYLT1Q8NBI6 393 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 NOA1Q8NC60 698 aaKnown RBP17.36■□□□□ 0.37
USH1C-204ENST00000526313 PROCA1Q8NCQ7 364 aaPredicted RBP17.36■□□□□ 0.37
USH1C-204ENST00000526313 HNRNPLLQ8WVV9 542 aaKnown RBP17.36■□□□□ 0.37
USH1C-204ENST00000526313 ALS2CR12Q96Q35 445 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 MMS19Q96T76 1030 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 USP20Q9Y2K6 914 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 TELO2Q9Y4R8 837 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 PFASO15067 1338 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 GFPT2O94808 682 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 TUBBP07437 444 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 TRIM49P0CI25 452 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 TRIM49CP0CI26 452 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 SMTNP53814 917 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 SP2Q02086 613 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 CKAP4Q07065 602 aaKnown RBP17.36■□□□□ 0.37
USH1C-204ENST00000526313 BMS1Q14692 1282 aaKnown RBP17.36■□□□□ 0.37
USH1C-204ENST00000526313 GJB7Q6PEY0 223 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 CREG2Q8IUH2 290 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 MAP4K3Q8IVH8 894 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 CCDC60Q8IWA6 550 aaPredicted RBP17.36■□□□□ 0.37
USH1C-204ENST00000526313 KCNN1Q92952 543 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 INTS2Q9H0H0 1204 aaKnown RBP17.36■□□□□ 0.37
USH1C-204ENST00000526313 HSPBP1Q9NZL4 362 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 RNF181Q9P0P0 153 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 TBX20Q9UMR3 447 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 IGSF9BQ9UPX0 1349 aa17.36■□□□□ 0.37
USH1C-204ENST00000526313 DOCK5Q9H7D0 1870 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 SPDYE4A6NLX3 237 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 KRT13P13646 458 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 EDNRBP24530 442 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 KLRC1P26715 233 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 STAT1P42224 750 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 IREB2P48200 963 aaKnown RBP17.35■□□□□ 0.37
USH1C-204ENST00000526313 ANKRD13CQ8N6S4 541 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 OLIG1Q8TAK6 271 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 CEP170P1Q96L14 293 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 ARID3AQ99856 593 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.35■□□□□ 0.37
USH1C-204ENST00000526313 GPR88Q9GZN0 384 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 NAGPAQ9UK23 515 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 EXOC7Q9UPT5 735 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 PCDHGC5Q9Y5F6 944 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 F8VZ95 297 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 PDE2AO00408 941 aaPredicted RBP17.35■□□□□ 0.37
USH1C-204ENST00000526313 CXCL11O14625 94 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 DGAT1O75907 488 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 SUPT20HL2P0C7V6 817 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 RFX1P22670 979 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 SOX5P35711 763 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 VAMP7P51809 220 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 MYL7Q01449 175 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 CNTN2Q02246 1040 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 ITIH3Q06033 890 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 DMP1Q13316 513 aaPredicted RBP17.35■□□□□ 0.37
USH1C-204ENST00000526313 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.35■□□□□ 0.37
USH1C-204ENST00000526313 MCPH1Q8NEM0 835 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 BSNDQ8WZ55 320 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 PNKPQ96T60 521 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 SYT11Q9BT88 431 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 TLR10Q9BXR5 811 aa17.35■□□□□ 0.37
USH1C-204ENST00000526313 PCIF1Q9H4Z3 704 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms