RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 COL4A4P53420 1690 aaPredicted RBP19.52■□□□□ 0.71
NR1H3-228ENST00000525441 CSDE1O75534 798 aaKnown RBP19.51■□□□□ 0.71
NR1H3-228ENST00000525441 SRGAP2CP0DJJ0 459 aa19.51■□□□□ 0.71
NR1H3-228ENST00000525441 MUTP22033 750 aa19.51■□□□□ 0.71
NR1H3-228ENST00000525441 RPA1P27694 616 aa19.51■□□□□ 0.71
NR1H3-228ENST00000525441 LAMTOR4Q0VGL1 99 aa19.51■□□□□ 0.71
NR1H3-228ENST00000525441 CUL4AQ13619 759 aa19.51■□□□□ 0.71
NR1H3-228ENST00000525441 CATSPER4Q7RTX7 472 aa19.51■□□□□ 0.71
NR1H3-228ENST00000525441 SRGAP1Q7Z6B7 1085 aa19.51■□□□□ 0.71
NR1H3-228ENST00000525441 FERMT3Q86UX7 667 aa19.51■□□□□ 0.71
NR1H3-228ENST00000525441 PIGOQ8TEQ8 1089 aa19.51■□□□□ 0.71
NR1H3-228ENST00000525441 MRPL38Q96DV4 380 aaKnown RBP19.51■□□□□ 0.71
NR1H3-228ENST00000525441 LRWD1Q9UFC0 647 aa19.51■□□□□ 0.71
NR1H3-228ENST00000525441 MRPL42Q9Y6G3 142 aaKnown RBP19.51■□□□□ 0.71
NR1H3-228ENST00000525441 TRANK1O15050 2925 aa19.51■□□□□ 0.71
NR1H3-228ENST00000525441 RALGAPA2Q2PPJ7 1873 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 A0A0U1RQF3 1178 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 TBKBP1A7MCY6 615 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 MED24O75448 989 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 LINC00271P0C7V0 271 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 PRPHP41219 470 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 PHKA2P46019 1235 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 GATMP50440 423 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 TFDP1Q14186 410 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 PDIA5Q14554 519 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 NAALADL2Q58DX5 795 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 ECHDC2Q86YB7 292 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 ATXN2LQ8WWM7 1075 aaKnown RBP19.5■□□□□ 0.71
NR1H3-228ENST00000525441 LMAN2LQ9H0V9 348 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 IFT122Q9HBG6 1241 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 XPNPEP1Q9NQW7 623 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 PRDM6Q9NQX0 595 aa19.5■□□□□ 0.71
NR1H3-228ENST00000525441 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.5■□□□□ 0.71
NR1H3-228ENST00000525441 DBR1Q9UK59 544 aaKnown RBP19.5■□□□□ 0.71
NR1H3-228ENST00000525441 PIN4Q9Y237 131 aaKnown RBP19.5■□□□□ 0.71
NR1H3-228ENST00000525441 EOMESO95936 686 aa19.49■□□□□ 0.71
NR1H3-228ENST00000525441 SKIP12755 728 aa19.49■□□□□ 0.71
NR1H3-228ENST00000525441 PDCP20941 246 aa19.49■□□□□ 0.71
NR1H3-228ENST00000525441 CCT6AP40227 531 aaKnown RBP19.49■□□□□ 0.71
NR1H3-228ENST00000525441 TIGD5Q53EQ6 642 aa19.49■□□□□ 0.71
NR1H3-228ENST00000525441 SPOUT1Q5T280 376 aaKnown RBP19.49■□□□□ 0.71
NR1H3-228ENST00000525441 FAM102BQ5T8I3 360 aa19.49■□□□□ 0.71
NR1H3-228ENST00000525441 TWF2Q6IBS0 349 aaKnown RBP19.49■□□□□ 0.71
NR1H3-228ENST00000525441 ABI1Q8IZP0 508 aa19.49■□□□□ 0.71
NR1H3-228ENST00000525441 RNF149Q8NC42 400 aa19.49■□□□□ 0.71
NR1H3-228ENST00000525441 TMEM117Q9H0C3 514 aa19.49■□□□□ 0.71
NR1H3-228ENST00000525441 AAASQ9NRG9 546 aa19.49■□□□□ 0.71
NR1H3-228ENST00000525441 NLRC5Q86WI3 1866 aa19.48■□□□□ 0.71
NR1H3-228ENST00000525441 USO1O60763 962 aaKnown RBP19.48■□□□□ 0.71
NR1H3-228ENST00000525441 FGFR1P11362 822 aa19.48■□□□□ 0.71
NR1H3-228ENST00000525441 RAB27AP51159 221 aa19.48■□□□□ 0.71
NR1H3-228ENST00000525441 PCBP1Q15365 356 aaKnown RBP eCLIP19.48■□□□□ 0.71
NR1H3-228ENST00000525441 AAK1Q2M2I8 961 aa19.48■□□□□ 0.71
NR1H3-228ENST00000525441 POTEGQ6S5H5 508 aa19.48■□□□□ 0.71
NR1H3-228ENST00000525441 DTHD1Q6ZMT9 781 aa19.48■□□□□ 0.71
NR1H3-228ENST00000525441 RNF169Q8NCN4 708 aa19.48■□□□□ 0.71
NR1H3-228ENST00000525441 MCPH1Q8NEM0 835 aa19.48■□□□□ 0.71
NR1H3-228ENST00000525441 P2RX5Q93086 422 aa19.48■□□□□ 0.71
NR1H3-228ENST00000525441 TRAIPQ9BWF2 469 aa19.48■□□□□ 0.71
NR1H3-228ENST00000525441 COG5Q9UP83 839 aa19.48■□□□□ 0.71
NR1H3-228ENST00000525441 ARID2Q68CP9 1835 aa19.48■□□□□ 0.71
NR1H3-228ENST00000525441 A0A087WWV3 80 aa19.47■□□□□ 0.71
NR1H3-228ENST00000525441 ARHGEF35A5YM69 484 aa19.47■□□□□ 0.71
NR1H3-228ENST00000525441 ARL2P36404 184 aa19.47■□□□□ 0.71
NR1H3-228ENST00000525441 MRPS5P82675 430 aaKnown RBP19.47■□□□□ 0.71
NR1H3-228ENST00000525441 POU5F1BQ06416 359 aa19.47■□□□□ 0.71
NR1H3-228ENST00000525441 KRT79Q5XKE5 535 aa19.47■□□□□ 0.71
NR1H3-228ENST00000525441 IGSF22Q8N9C0 903 aa19.47■□□□□ 0.71
NR1H3-228ENST00000525441 SNX29Q8TEQ0 813 aa19.47■□□□□ 0.71
NR1H3-228ENST00000525441 RSPH1Q8WYR4 309 aa19.47■□□□□ 0.71
NR1H3-228ENST00000525441 AGPAT5Q9NUQ2 364 aa19.47■□□□□ 0.71
NR1H3-228ENST00000525441 PCDHB12Q9Y5F1 795 aa19.47■□□□□ 0.71
NR1H3-228ENST00000525441 ERLIN2O94905 339 aa19.46■□□□□ 0.71
NR1H3-228ENST00000525441 PTENP60484 403 aa19.46■□□□□ 0.71
NR1H3-228ENST00000525441 NCBP1Q09161 790 aaKnown RBP19.46■□□□□ 0.71
NR1H3-228ENST00000525441 CSPP1Q1MSJ5 1256 aa19.46■□□□□ 0.71
NR1H3-228ENST00000525441 TJAP1Q5JTD0 557 aa19.46■□□□□ 0.71
NR1H3-228ENST00000525441 BRAPQ7Z569 592 aa19.46■□□□□ 0.71
NR1H3-228ENST00000525441 ZNF598Q86UK7 904 aaKnown RBP19.46■□□□□ 0.71
NR1H3-228ENST00000525441 LRRC43Q8N309 656 aa19.46■□□□□ 0.71
NR1H3-228ENST00000525441 ASAP3Q8TDY4 903 aa19.46■□□□□ 0.71
NR1H3-228ENST00000525441 SYMPKQ92797 1274 aaKnown RBP19.46■□□□□ 0.71
NR1H3-228ENST00000525441 HLA-CQ95604 372 aa19.46■□□□□ 0.71
NR1H3-228ENST00000525441 POLR3FQ9H1D9 316 aaPredicted RBP19.46■□□□□ 0.71
NR1H3-228ENST00000525441 PRUNE2Q8WUY3 3088 aa19.45■□□□□ 0.7
NR1H3-228ENST00000525441 DLL1O00548 723 aa19.45■□□□□ 0.7
NR1H3-228ENST00000525441 GRM6O15303 877 aa19.45■□□□□ 0.7
NR1H3-228ENST00000525441 LAG3P18627 525 aa19.45■□□□□ 0.7
NR1H3-228ENST00000525441 ATP2C1P98194 919 aaPredicted RBP19.45■□□□□ 0.7
NR1H3-228ENST00000525441 PADI6Q6TGC4 694 aa19.45■□□□□ 0.7
NR1H3-228ENST00000525441 IFNLR1Q8IU57 520 aaPredicted RBP19.45■□□□□ 0.7
NR1H3-228ENST00000525441 INTS4Q96HW7 963 aaKnown RBP19.45■□□□□ 0.7
NR1H3-228ENST00000525441 CASD1Q96PB1 797 aa19.45■□□□□ 0.7
NR1H3-228ENST00000525441 MRPL9Q9BYD2 267 aaKnown RBP19.45■□□□□ 0.7
NR1H3-228ENST00000525441 NSUN3Q9H649 340 aaKnown RBP19.45■□□□□ 0.7
NR1H3-228ENST00000525441 MINDY3Q9H8M7 445 aa19.45■□□□□ 0.7
NR1H3-228ENST00000525441 FAM105AQ9NUU6 356 aa19.45■□□□□ 0.7
NR1H3-228ENST00000525441 RNF19AQ9NV58 838 aa19.45■□□□□ 0.7
NR1H3-228ENST00000525441 TYW1Q9NV66 732 aaKnown RBP19.45■□□□□ 0.7
NR1H3-228ENST00000525441 PLAGL2Q9UPG8 496 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms