RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 DACT1Q9NYF0 836 aa20.74■□□□□ 0.91
CAPN1-203ENST00000525013 PPME1Q9Y570 386 aa20.74■□□□□ 0.91
CAPN1-203ENST00000525013 PCDHB12Q9Y5F1 795 aa20.74■□□□□ 0.91
CAPN1-203ENST00000525013 HOXA2O43364 376 aa20.73■□□□□ 0.91
CAPN1-203ENST00000525013 SLITRK3O94933 977 aa20.73■□□□□ 0.91
CAPN1-203ENST00000525013 ABI1Q8IZP0 508 aa20.73■□□□□ 0.91
CAPN1-203ENST00000525013 FBXO18Q8NFZ0 1043 aa20.73■□□□□ 0.91
CAPN1-203ENST00000525013 PRPF31Q8WWY3 499 aaKnown RBP20.73■□□□□ 0.91
CAPN1-203ENST00000525013 PSPC1Q8WXF1 523 aaKnown RBP20.73■□□□□ 0.91
CAPN1-203ENST00000525013 MTMR9Q96QG7 549 aa20.73■□□□□ 0.91
CAPN1-203ENST00000525013 TMEM117Q9H0C3 514 aa20.73■□□□□ 0.91
CAPN1-203ENST00000525013 DHX33Q9H6R0 707 aaKnown RBP20.73■□□□□ 0.91
CAPN1-203ENST00000525013 UPF2Q9HAU5 1272 aaKnown RBP20.73■□□□□ 0.91
CAPN1-203ENST00000525013 TYW1Q9NV66 732 aaKnown RBP20.73■□□□□ 0.91
CAPN1-203ENST00000525013 COL4A3BPQ9Y5P4 624 aa20.73■□□□□ 0.91
CAPN1-203ENST00000525013 PLXNA4Q9HCM2 1894 aa20.73■□□□□ 0.91
CAPN1-203ENST00000525013 SRGAP2CP0DJJ0 459 aa20.72■□□□□ 0.91
CAPN1-203ENST00000525013 EMC2Q15006 297 aa20.72■□□□□ 0.91
CAPN1-203ENST00000525013 CATSPER4Q7RTX7 472 aa20.72■□□□□ 0.91
CAPN1-203ENST00000525013 SPPL3Q8TCT6 385 aa20.72■□□□□ 0.91
CAPN1-203ENST00000525013 CCDC43Q96MW1 224 aaKnown RBP20.72■□□□□ 0.91
CAPN1-203ENST00000525013 TMEM60Q9H2L4 133 aa20.72■□□□□ 0.91
CAPN1-203ENST00000525013 FOXP1Q9H334 677 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-203ENST00000525013 CHST12Q9NRB3 414 aa20.72■□□□□ 0.91
CAPN1-203ENST00000525013 HCSTQ9UBK5 93 aa20.72■□□□□ 0.91
CAPN1-203ENST00000525013 A0A0U1RQF3 1178 aa20.71■□□□□ 0.91
CAPN1-203ENST00000525013 ST18O60284 1047 aa20.71■□□□□ 0.91
CAPN1-203ENST00000525013 DNAJB1P25685 340 aa20.71■□□□□ 0.91
CAPN1-203ENST00000525013 ZNF174Q15697 407 aa20.71■□□□□ 0.91
CAPN1-203ENST00000525013 LEXMQ3ZCV2 418 aa20.71■□□□□ 0.91
CAPN1-203ENST00000525013 TWF2Q6IBS0 349 aaKnown RBP20.71■□□□□ 0.91
CAPN1-203ENST00000525013 NEK9Q8TD19 979 aa20.71■□□□□ 0.91
CAPN1-203ENST00000525013 TCP11Q8WWU5 503 aa20.71■□□□□ 0.91
CAPN1-203ENST00000525013 PABPC5Q96DU9 382 aaKnown RBP20.71■□□□□ 0.91
CAPN1-203ENST00000525013 HSD17B14Q9BPX1 270 aa20.71■□□□□ 0.91
CAPN1-203ENST00000525013 IGFLR1Q9H665 355 aa20.71■□□□□ 0.91
CAPN1-203ENST00000525013 CLDND1Q9NY35 253 aa20.71■□□□□ 0.91
CAPN1-203ENST00000525013 PIN4Q9Y237 131 aaKnown RBP20.71■□□□□ 0.91
CAPN1-203ENST00000525013 POTEMA6NI47 508 aa20.7■□□□□ 0.9
CAPN1-203ENST00000525013 H3BQ06 376 aaPredicted RBP20.7■□□□□ 0.9
CAPN1-203ENST00000525013 GAS2O43903 313 aaKnown RBP20.7■□□□□ 0.9
CAPN1-203ENST00000525013 EOMESO95936 686 aa20.7■□□□□ 0.9
CAPN1-203ENST00000525013 LAMTOR4Q0VGL1 99 aa20.7■□□□□ 0.9
CAPN1-203ENST00000525013 CAMK1Q14012 370 aa20.7■□□□□ 0.9
CAPN1-203ENST00000525013 THNSL1Q8IYQ7 743 aa20.7■□□□□ 0.9
CAPN1-203ENST00000525013 COLGALT1Q8NBJ5 622 aa20.7■□□□□ 0.9
CAPN1-203ENST00000525013 POF1BQ8WVV4 589 aa20.7■□□□□ 0.9
CAPN1-203ENST00000525013 CASD1Q96PB1 797 aa20.7■□□□□ 0.9
CAPN1-203ENST00000525013 MTRQ99707 1265 aa20.7■□□□□ 0.9
CAPN1-203ENST00000525013 IFT122Q9HBG6 1241 aa20.7■□□□□ 0.9
CAPN1-203ENST00000525013 RNF19AQ9NV58 838 aa20.7■□□□□ 0.9
CAPN1-203ENST00000525013 NCK2O43639 380 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 LYPLA2O95372 231 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 LAG3P18627 525 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 HYAL1Q12794 435 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 CSPP1Q1MSJ5 1256 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 NOSTRINQ8IVI9 506 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 LRRC43Q8N309 656 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 HELQQ8TDG4 1101 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 MICAL1Q8TDZ2 1067 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 PIGOQ8TEQ8 1089 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 PPP2R3CQ969Q6 453 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 CWH43Q9H720 699 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 ANKEF1Q9NU02 776 aa20.69■□□□□ 0.9
CAPN1-203ENST00000525013 A0A087WWV3 80 aa20.68■□□□□ 0.9
CAPN1-203ENST00000525013 ASAP2O43150 1006 aa20.68■□□□□ 0.9
CAPN1-203ENST00000525013 FGF18O76093 207 aa20.68■□□□□ 0.9
CAPN1-203ENST00000525013 IRS1P35568 1242 aa20.68■□□□□ 0.9
CAPN1-203ENST00000525013 TECP42680 631 aa20.68■□□□□ 0.9
CAPN1-203ENST00000525013 PHKA2P46019 1235 aa20.68■□□□□ 0.9
CAPN1-203ENST00000525013 LONRF3Q496Y0 759 aa20.68■□□□□ 0.9
CAPN1-203ENST00000525013 CLLU1OSQ5K130 101 aa20.68■□□□□ 0.9
CAPN1-203ENST00000525013 TTC38Q5R3I4 469 aa20.68■□□□□ 0.9
CAPN1-203ENST00000525013 PTCRAQ6ISU1 281 aaPredicted RBP20.68■□□□□ 0.9
CAPN1-203ENST00000525013 LRRC55Q6ZSA7 311 aa20.68■□□□□ 0.9
CAPN1-203ENST00000525013 ZNF598Q86UK7 904 aaKnown RBP20.68■□□□□ 0.9
CAPN1-203ENST00000525013 FERMT3Q86UX7 667 aa20.68■□□□□ 0.9
CAPN1-203ENST00000525013 RNF149Q8NC42 400 aa20.68■□□□□ 0.9
CAPN1-203ENST00000525013 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.68■□□□□ 0.9
CAPN1-203ENST00000525013 NOL7Q9UMY1 257 aaKnown RBP20.68■□□□□ 0.9
CAPN1-203ENST00000525013 MUC3AQ02505 3323 aa20.67■□□□□ 0.9
CAPN1-203ENST00000525013 OR52Z1P0C646 297 aa20.67■□□□□ 0.9
CAPN1-203ENST00000525013 SKIP12755 728 aa20.67■□□□□ 0.9
CAPN1-203ENST00000525013 ATF7P17544 494 aaPredicted RBP20.67■□□□□ 0.9
CAPN1-203ENST00000525013 GTF2F1P35269 517 aaKnown RBP eCLIP20.67■□□□□ 0.9
CAPN1-203ENST00000525013 SRGAP1Q7Z6B7 1085 aa20.67■□□□□ 0.9
CAPN1-203ENST00000525013 LPPQ93052 612 aa20.67■□□□□ 0.9
CAPN1-203ENST00000525013 MINDY3Q9H8M7 445 aa20.67■□□□□ 0.9
CAPN1-203ENST00000525013 XPNPEP1Q9NQW7 623 aa20.67■□□□□ 0.9
CAPN1-203ENST00000525013 KIF3AQ9Y496 699 aa20.67■□□□□ 0.9
CAPN1-203ENST00000525013 DGAT1O75907 488 aa20.66■□□□□ 0.9
CAPN1-203ENST00000525013 UBE3AQ05086 875 aa20.66■□□□□ 0.9
CAPN1-203ENST00000525013 ORC2Q13416 577 aaPredicted RBP20.66■□□□□ 0.9
CAPN1-203ENST00000525013 MXD4Q14582 209 aaPredicted RBP20.66■□□□□ 0.9
CAPN1-203ENST00000525013 COL19A1Q14993 1142 aa20.66■□□□□ 0.9
CAPN1-203ENST00000525013 PUS10Q3MIT2 529 aaKnown RBP20.66■□□□□ 0.9
CAPN1-203ENST00000525013 KCNT2Q6UVM3 1135 aa20.66■□□□□ 0.9
CAPN1-203ENST00000525013 RBM23Q86U06 439 aaKnown RBP20.66■□□□□ 0.9
CAPN1-203ENST00000525013 ZNF558Q96NG5 402 aa20.66■□□□□ 0.9
CAPN1-203ENST00000525013 TRAIPQ9BWF2 469 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms