RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 MRIQ9BWK5 157 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 AMNQ9BXJ7 453 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 PCGF6Q9BYE7 350 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 KCNH7Q9NS40 1196 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 Q9UFV3 132 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 PUF60Q9UHX1 559 aaKnown RBP4.3□□□□□ -1.72
CSDE1-208ENST00000524652 ASB1Q9Y576 335 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 CLTCL1P53675 1640 aa4.3□□□□□ -1.72
CSDE1-208ENST00000524652 NPATQ14207 1427 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 ARID4BQ4LE39 1312 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-208ENST00000524652 MED1Q15648 1581 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-208ENST00000524652 CCDC163A0A0D9SF12 145 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 KCNK3O14649 394 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 SDHAP31040 664 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 FOXE3Q13461 319 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 SEC23AQ15436 765 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 TBR1Q16650 682 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 USP39Q53GS9 565 aaKnown RBP4.29□□□□□ -1.72
CSDE1-208ENST00000524652 LARP4Q71RC2 724 aaKnown RBP eCLIP4.29□□□□□ -1.72
CSDE1-208ENST00000524652 CISD2Q8N5K1 135 aaKnown RBP4.29□□□□□ -1.72
CSDE1-208ENST00000524652 JMYQ8N9B5 988 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 ASB15Q8WXK1 588 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 CFHR4Q92496 578 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 ZNF503Q96F45 646 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 FAM89AQ96GI7 184 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 OR14A2Q96R54 314 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 PLA2G12BQ9BX93 195 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 KIAA1683Q9H0B3 1180 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 OR10A2Q9H208 303 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 UCKL1Q9NWZ5 548 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 SNTG2Q9NY99 539 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 NDOR1Q9UHB4 597 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 SFMBT1Q9UHJ3 866 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 PLA2R1Q13018 1463 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 ARHGAP31Q2M1Z3 1444 aa4.29□□□□□ -1.72
CSDE1-208ENST00000524652 STRCQ7RTU9 1775 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 PMS2P1A4D2B8 440 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 SCDO00767 359 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 KCNQ2O43526 872 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 NPTXRO95502 500 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 MMEP08473 750 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 ACO1P21399 889 aaKnown RBP4.28□□□□□ -1.72
CSDE1-208ENST00000524652 GTF2F1P35269 517 aaKnown RBP eCLIP4.28□□□□□ -1.721e-7■■■■■ 29.4
CSDE1-208ENST00000524652 MEOX1P50221 254 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 CD83Q01151 205 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 RBL2Q08999 1139 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 PCOLCEQ15113 449 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 GRAMD4Q6IC98 578 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 MAMDC4Q6UXC1 1216 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 Q6ZSN1 163 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 ZSWIM2Q8NEG5 633 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 CALML6Q8TD86 181 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 MAGEB10Q96LZ2 347 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-208ENST00000524652 C12orf65Q9H3J6 166 aaKnown RBP4.28□□□□□ -1.72
CSDE1-208ENST00000524652 NELFAQ9H3P2 528 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 RGS17Q9UGC6 210 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-208ENST00000524652 COQ6Q9Y2Z9 468 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 B3GALT1Q9Y5Z6 326 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 HS3ST3A1Q9Y663 406 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 POLR1AO95602 1720 aaPredicted RBP4.28□□□□□ -1.72
CSDE1-208ENST00000524652 ERVK-7P63135 1459 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 NOS1P29475 1434 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 TMEM131LA2VDJ0 1609 aa4.28□□□□□ -1.72
CSDE1-208ENST00000524652 NUP155O75694 1391 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 ZMYM3Q14202 1370 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 DHX57Q6P158 1386 aaKnown RBP4.27□□□□□ -1.73
CSDE1-208ENST00000524652 PPLO60437 1756 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 TRPM2O94759 1503 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 KDM5AP29375 1690 aaKnown RBP4.27□□□□□ -1.73
CSDE1-208ENST00000524652 SLC12A8A0AV02 714 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 FOXP2O15409 715 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 HIP1RO75146 1068 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 RASGRP1O95267 797 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 MRE11P49959 708 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 MAP3K12Q12852 859 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 MOGSQ13724 837 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 NOLC1Q14978 699 aaKnown RBP eCLIP4.27□□□□□ -1.73
CSDE1-208ENST00000524652 NRN1LQ496H8 165 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 TM4SF20Q53R12 229 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 LRSAM1Q6UWE0 723 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 OVCH1Q7RTY7 1134 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 FILIP1Q7Z7B0 1213 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 RTKN2Q8IZC4 609 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 HIPK4Q8NE63 616 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 SLC7A14Q8TBB6 771 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 DLG3Q92796 817 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 MKL1Q969V6 931 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 GBP4Q96PP9 640 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 MRPL4Q9BYD3 311 aaKnown RBP4.27□□□□□ -1.73
CSDE1-208ENST00000524652 ZNF341Q9BYN7 854 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 SLITRK6Q9H5Y7 841 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 CDC42EP3Q9UKI2 254 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 VWA7Q9Y334 891 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 CNTLNQ9NXG0 1405 aa4.27□□□□□ -1.73
CSDE1-208ENST00000524652 CEP170BQ9Y4F5 1589 aaPredicted RBP4.27□□□□□ -1.73
CSDE1-208ENST00000524652 WASHC2CQ9Y4E1 1318 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 RPRD2Q5VT52 1461 aaKnown RBP4.26□□□□□ -1.73
CSDE1-208ENST00000524652 FAM221BA6H8Z2 402 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 RASSF10A6NK89 507 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 NPIPB8E9PQR5 432 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms