RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 TCF25Q9BQ70 676 aa13.3□□□□□ -0.28
SPARC-206ENST00000524277 ENTPD7Q9NQZ7 604 aa13.3□□□□□ -0.28
SPARC-206ENST00000524277 RNF19AQ9NV58 838 aa13.3□□□□□ -0.28
SPARC-206ENST00000524277 DDX25Q9UHL0 483 aaKnown RBP13.3□□□□□ -0.28
SPARC-206ENST00000524277 BARX2Q9UMQ3 279 aaPredicted RBP13.3□□□□□ -0.28
SPARC-206ENST00000524277 USP15Q9Y4E8 981 aaPredicted RBP13.3□□□□□ -0.28
SPARC-206ENST00000524277 ATG2AQ2TAZ0 1938 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 DDX11L8A8MPP1 907 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 PER2O15055 1255 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 EIF5BO60841 1220 aaKnown RBP13.29□□□□□ -0.28
SPARC-206ENST00000524277 STBD1O95210 358 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 TDP2O95551 362 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 P4HBP07237 508 aaKnown RBP13.29□□□□□ -0.28
SPARC-206ENST00000524277 QARSP47897 775 aaKnown RBP13.29□□□□□ -0.28
SPARC-206ENST00000524277 PPP2R5CQ13362 524 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 KCNC3Q14003 757 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 GIT2Q14161 759 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 SMC1AQ14683 1233 aaKnown RBP13.29□□□□□ -0.28
SPARC-206ENST00000524277 TPRNQ4KMQ1 711 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 LRRC55Q6ZSA7 311 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 TMC7Q7Z402 723 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 SUSD6Q92537 303 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 WASF1Q92558 559 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 CASP10Q92851 521 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 CEP89Q96ST8 783 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 SUCLA2Q9P2R7 463 aaPredicted RBP13.29□□□□□ -0.28
SPARC-206ENST00000524277 MUTYHQ9UIF7 546 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 KIAA1671Q9BY89 1806 aa13.29□□□□□ -0.28
SPARC-206ENST00000524277 GAS2O43903 313 aaKnown RBP13.28□□□□□ -0.28
SPARC-206ENST00000524277 ZNF623O75123 536 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 PHKA2P46019 1235 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 ANKRD1Q15327 319 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 NPY5RQ15761 445 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 INF2Q27J81 1249 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 LETM2Q2VYF4 491 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 CLLU1OSQ5K130 101 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 PLPP4Q5VZY2 271 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 TWF2Q6IBS0 349 aaKnown RBP13.28□□□□□ -0.28
SPARC-206ENST00000524277 ANKRD54Q6NXT1 300 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 OTUD6AQ7L8S5 288 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 NEK8Q86SG6 692 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 RHPN2Q8IUC4 686 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 SLC39A11Q8N1S5 342 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 MRPL43Q8N983 215 aaKnown RBP13.28□□□□□ -0.28
SPARC-206ENST00000524277 RNF169Q8NCN4 708 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 SLC7A3Q8WY07 619 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 PGBD4Q96DM1 585 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 TMEM169Q96HH4 297 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 PRRX2Q99811 253 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 PHF20Q9BVI0 1012 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 S1PR5Q9H228 398 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 SLKQ9H2G2 1235 aaPredicted RBP13.28□□□□□ -0.28
SPARC-206ENST00000524277 KCNMB3Q9NPA1 279 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 PCDHGC5Q9Y5F6 944 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 STK36Q9NRP7 1315 aa13.28□□□□□ -0.28
SPARC-206ENST00000524277 A0A087WZ62 844 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 ASAP2O43150 1006 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 MARCH6O60337 910 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 BAG4O95429 457 aaKnown RBP13.27□□□□□ -0.29
SPARC-206ENST00000524277 RFC5P40937 340 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 TECP42680 631 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 POLGP54098 1239 aaPredicted RBP13.27□□□□□ -0.29
SPARC-206ENST00000524277 ANAPC15P60006 121 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 ITIH3Q06033 890 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 STK3Q13188 491 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 PCBP1Q15365 356 aaKnown RBP eCLIP13.27□□□□□ -0.29
SPARC-206ENST00000524277 GLB1LQ6UWU2 654 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 HFE2Q6ZVN8 426 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 ANO5Q75V66 913 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 CATSPER4Q7RTX7 472 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 SLFN12Q8IYM2 578 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 HELQQ8TDG4 1101 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 TCP11Q8WWU5 503 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 GJA10Q969M2 543 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 NECTIN4Q96NY8 510 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 FDXACB1Q9BRP7 624 aaPredicted RBP13.27□□□□□ -0.29
SPARC-206ENST00000524277 CYP26B1Q9NR63 512 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 HCSTQ9UBK5 93 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 NR2E1Q9Y466 385 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 IRAK3Q9Y616 596 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 WDR81Q562E7 1941 aa13.27□□□□□ -0.29
SPARC-206ENST00000524277 PFKFB2O60825 505 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 FGFR4P22455 802 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 BCAR1P56945 870 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 ZXDAP98168 799 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 DRP2Q13474 957 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 EPHA7Q15375 998 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 CES5AQ6NT32 575 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 TRIM67Q6ZTA4 783 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 SRGAP1Q7Z6B7 1085 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 C4orf19Q8IY42 314 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 TMEM87AQ8NBN3 555 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 VN1R2Q8NFZ6 395 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 PSPC1Q8WXF1 523 aaKnown RBP13.26□□□□□ -0.29
SPARC-206ENST00000524277 ZNF668Q96K58 619 aaPredicted RBP13.26□□□□□ -0.29
SPARC-206ENST00000524277 CEP170P1Q96L14 293 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 PLXNA4Q9HCM2 1894 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 BRMS1Q9HCU9 246 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 FAM105AQ9NUU6 356 aa13.26□□□□□ -0.29
SPARC-206ENST00000524277 KANSL3Q9P2N6 904 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms