RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 COL4A3BPQ9Y5P4 624 aa18.14■□□□□ 0.49
CLN8-206ENST00000523237 A0A0U1RQF3 1178 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 SLITRK3O94933 977 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 ATP2B1P20020 1258 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 RABEP1Q15276 862 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 CSPP1Q1MSJ5 1256 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 XKR9Q5GH70 373 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 EP400NLQ6ZTU2 488 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 KSR1Q8IVT5 923 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 FBXO18Q8NFZ0 1043 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 TCP11Q8WWU5 503 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 PSPC1Q8WXF1 523 aaKnown RBP18.13■□□□□ 0.49
CLN8-206ENST00000523237 NECAB3Q96P71 396 aaPredicted RBP18.13■□□□□ 0.49
CLN8-206ENST00000523237 MTMR9Q96QG7 549 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 HSD17B14Q9BPX1 270 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 TYW1Q9NV66 732 aaKnown RBP18.13■□□□□ 0.49
CLN8-206ENST00000523237 MYO7AQ13402 2215 aa18.13■□□□□ 0.49
CLN8-206ENST00000523237 CSPG5O95196 566 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 LYPLA2O95372 231 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 EOMESO95936 686 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 LAG3P18627 525 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 MCM7P33993 719 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 GNL2Q13823 731 aaKnown RBP18.12■□□□□ 0.49
CLN8-206ENST00000523237 CAMK1Q14012 370 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 COL19A1Q14993 1142 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 EMC2Q15006 297 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 RNF169Q8NCN4 708 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 POF1BQ8WVV4 589 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 PPP2R3CQ969Q6 453 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 TMEM143Q96AN5 459 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 CASD1Q96PB1 797 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 UPF2Q9HAU5 1272 aaKnown RBP18.12■□□□□ 0.49
CLN8-206ENST00000523237 BMP2KQ9NSY1 1161 aaPredicted RBP18.12■□□□□ 0.49
CLN8-206ENST00000523237 CLDND1Q9NY35 253 aa18.12■□□□□ 0.49
CLN8-206ENST00000523237 ZBTB39O15060 712 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 ASAP2O43150 1006 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 ST18O60284 1047 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 SKIP12755 728 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 DNAJB1P25685 340 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 UBE3AQ05086 875 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 ORC2Q13416 577 aaPredicted RBP18.11■□□□□ 0.49
CLN8-206ENST00000523237 PUS10Q3MIT2 529 aaKnown RBP18.11■□□□□ 0.49
CLN8-206ENST00000523237 TWF2Q6IBS0 349 aaKnown RBP18.11■□□□□ 0.49
CLN8-206ENST00000523237 CATSPER4Q7RTX7 472 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 ZNF598Q86UK7 904 aaKnown RBP18.11■□□□□ 0.49
CLN8-206ENST00000523237 THNSL1Q8IYQ7 743 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 LRRC43Q8N309 656 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 COLGALT1Q8NBJ5 622 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.11■□□□□ 0.49
CLN8-206ENST00000523237 PRPF31Q8WWY3 499 aaKnown RBP18.11■□□□□ 0.49
CLN8-206ENST00000523237 MTRQ99707 1265 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 TRAIPQ9BWF2 469 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 TMEM60Q9H2L4 133 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 CWH43Q9H720 699 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 IFT122Q9HBG6 1241 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 ANKEF1Q9NU02 776 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 RNF19AQ9NV58 838 aa18.11■□□□□ 0.49
CLN8-206ENST00000523237 PIN4Q9Y237 131 aaKnown RBP18.11■□□□□ 0.49
CLN8-206ENST00000523237 H3BQ06 376 aaPredicted RBP18.1■□□□□ 0.49
CLN8-206ENST00000523237 LAMTOR4Q0VGL1 99 aa18.1■□□□□ 0.49
CLN8-206ENST00000523237 HYAL1Q12794 435 aa18.1■□□□□ 0.49
CLN8-206ENST00000523237 SRGAP1Q7Z6B7 1085 aa18.1■□□□□ 0.49
CLN8-206ENST00000523237 NOSTRINQ8IVI9 506 aa18.1■□□□□ 0.49
CLN8-206ENST00000523237 CCDC43Q96MW1 224 aaKnown RBP18.1■□□□□ 0.49
CLN8-206ENST00000523237 HCSTQ9UBK5 93 aa18.1■□□□□ 0.49
CLN8-206ENST00000523237 NCOR1O75376 2440 aa18.1■□□□□ 0.49
CLN8-206ENST00000523237 POTEMA6NI47 508 aa18.09■□□□□ 0.49
CLN8-206ENST00000523237 DGAT1O75907 488 aa18.09■□□□□ 0.49
CLN8-206ENST00000523237 FGF18O76093 207 aa18.09■□□□□ 0.49
CLN8-206ENST00000523237 SRGAP2CP0DJJ0 459 aa18.09■□□□□ 0.49
CLN8-206ENST00000523237 ATF7P17544 494 aaPredicted RBP18.09■□□□□ 0.49
CLN8-206ENST00000523237 PHKA2P46019 1235 aa18.09■□□□□ 0.49
CLN8-206ENST00000523237 CTC1Q2NKJ3 1217 aa18.09■□□□□ 0.49
CLN8-206ENST00000523237 CLLU1OSQ5K130 101 aa18.09■□□□□ 0.49
CLN8-206ENST00000523237 PTCRAQ6ISU1 281 aaPredicted RBP18.09■□□□□ 0.49
CLN8-206ENST00000523237 LRRC55Q6ZSA7 311 aa18.09■□□□□ 0.49
CLN8-206ENST00000523237 FERMT3Q86UX7 667 aa18.09■□□□□ 0.49
CLN8-206ENST00000523237 HELQQ8TDG4 1101 aa18.09■□□□□ 0.49
CLN8-206ENST00000523237 RSPH1Q8WYR4 309 aa18.09■□□□□ 0.49
CLN8-206ENST00000523237 MRPL9Q9BYD2 267 aaKnown RBP18.09■□□□□ 0.49
CLN8-206ENST00000523237 IGFLR1Q9H665 355 aa18.09■□□□□ 0.49
CLN8-206ENST00000523237 NOL7Q9UMY1 257 aaKnown RBP18.09■□□□□ 0.49
CLN8-206ENST00000523237 OR52Z1P0C646 297 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 IRS1P35568 1242 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 PPM1AP35813 382 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 TRAPPC10P48553 1259 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 RAB27AP51159 221 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 MXD4Q14582 209 aaPredicted RBP18.08■□□□□ 0.48
CLN8-206ENST00000523237 ZNF174Q15697 407 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 TTC38Q5R3I4 469 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 RNF149Q8NC42 400 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 MICAL1Q8TDZ2 1067 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 ZNF558Q96NG5 402 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 TLR9Q9NR96 1032 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 AGPAT5Q9NUQ2 364 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 FAM105AQ9NUU6 356 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 FAM50BQ9Y247 325 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 KIF3AQ9Y496 699 aa18.08■□□□□ 0.48
CLN8-206ENST00000523237 BDP1A6H8Y1 2624 aa18.07■□□□□ 0.48
CLN8-206ENST00000523237 GRXCR2A6NFK2 248 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms