RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 GMNCA6NCL1 334 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 RAD17O75943 681 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 SERPINB6P35237 376 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 IRAK1P51617 712 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 PRELPP51888 382 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 ASPHQ12797 758 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 STK4Q13043 487 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 KCTD2Q14681 263 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 PYROXD1Q8WU10 500 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 SLITRK6Q9H5Y7 841 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 RBM12Q9NTZ6 932 aaKnown RBP14.81□□□□□ -0.04
SYNPO-205ENST00000522122 A0A087X0B3 334 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 PRLRP16471 622 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 DRAP1Q14919 205 aaPredicted RBP14.81□□□□□ -0.04
SYNPO-205ENST00000522122 DBN1Q16643 649 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 FIGNQ5HY92 759 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 RCSD1Q6JBY9 416 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 PADI6Q6TGC4 694 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 TBC1D1Q86TI0 1168 aaPredicted RBP14.81□□□□□ -0.04
SYNPO-205ENST00000522122 TMEM139Q8IV31 216 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 CALR3Q96L12 384 aaKnown RBP14.81□□□□□ -0.04
SYNPO-205ENST00000522122 TUBB6Q9BUF5 446 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 ADAM22Q9P0K1 906 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 SEL1LQ9UBV2 794 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 USH1CQ9Y6N9 552 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 PDIA5Q14554 519 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 QRICH1Q2TAL8 776 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 SH2D4BQ5SQS7 431 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 KCTD6Q8NC69 237 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 KDM3BQ7LBC6 1761 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 PEX19P40855 299 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 SLFN12LQ6IEE8 588 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 SESTD1Q86VW0 696 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 SLC5A4Q9NY91 659 aa14.81□□□□□ -0.04
SYNPO-205ENST00000522122 PACSIN2Q9UNF0 486 aaPredicted RBP14.81□□□□□ -0.04
SYNPO-205ENST00000522122 SETD1AO15047 1707 aaKnown RBP14.8□□□□□ -0.04
SYNPO-205ENST00000522122 FRMD3A2A2Y4 597 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 GPC4O75487 556 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 ASNSP08243 561 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 MDH1P40925 334 aaKnown RBP14.8□□□□□ -0.04
SYNPO-205ENST00000522122 CRKP46108 304 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 SH3BGRP55822 239 aaPredicted RBP14.8□□□□□ -0.04
SYNPO-205ENST00000522122 PITPNM3Q9BZ71 974 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 TMEM60Q9H2L4 133 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 TFR2Q9UP52 801 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 NOC2LQ9Y3T9 749 aaKnown RBP14.8□□□□□ -0.04
SYNPO-205ENST00000522122 MEFVO15553 781 aaPredicted RBP14.8□□□□□ -0.04
SYNPO-205ENST00000522122 XPOTO43592 962 aaKnown RBP14.8□□□□□ -0.04
SYNPO-205ENST00000522122 AARSP49588 968 aaKnown RBP eCLIP14.8□□□□□ -0.04
SYNPO-205ENST00000522122 MAP7Q14244 749 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 EXOC8Q8IYI6 725 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 SYN2Q92777 582 aaPredicted RBP14.8□□□□□ -0.04
SYNPO-205ENST00000522122 ABCB11O95342 1321 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 PPP1R37O75864 691 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 ACTN1P12814 892 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 USP11P51784 963 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 SURF1Q15526 300 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 SLC18A3Q16572 532 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 ADGRF4Q8IZF3 695 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 ZNF473Q8WTR7 871 aaKnown RBP14.8□□□□□ -0.04
SYNPO-205ENST00000522122 WDR91A4D1P6 747 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 IPO5O00410 1097 aaKnown RBP14.8□□□□□ -0.04
SYNPO-205ENST00000522122 CHUKO15111 745 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 ZNF211Q13398 564 aaPredicted RBP14.8□□□□□ -0.04
SYNPO-205ENST00000522122 ERICH1Q86X53 443 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 CEP120Q8N960 986 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 DYDC2Q96IM9 177 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 MS4A14Q96JA4 679 aa14.8□□□□□ -0.04
SYNPO-205ENST00000522122 MAPK13O15264 365 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 GUCY1A3Q02108 690 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 TTI2Q6NXR4 508 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 RNF169Q8NCN4 708 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 TJP3O95049 919 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 GSTA1P08263 222 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 GSTA2P09210 222 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 ANXA13P27216 316 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 OR6B2Q6IFH4 312 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 CCNYQ8ND76 341 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 MSTO1Q9BUK6 570 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 VCX3AQ9NNX9 186 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 F5H6K3 240 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 LDHAP00338 332 aaKnown RBP14.79□□□□□ -0.04
SYNPO-205ENST00000522122 ECE1P42892 770 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 PMS2P54278 862 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 KLRC3Q07444 240 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 ZBTB33Q86T24 672 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 ZIM3Q96PE6 472 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 FAM196BA6NMK8 535 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 PRPSAP2O60256 369 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 FTLP02792 175 aaPredicted RBP14.79□□□□□ -0.04
SYNPO-205ENST00000522122 BAG6P46379 1132 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 SPARCL1Q14515 664 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 NAB2Q15742 525 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 RNF207Q6ZRF8 634 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 GLYCTKQ8IVS8 523 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 MCPH1Q8NEM0 835 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 HPS3Q969F9 1004 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 AKT3Q9Y243 479 aa14.79□□□□□ -0.04
SYNPO-205ENST00000522122 SLC26A4O43511 780 aa14.78□□□□□ -0.04
SYNPO-205ENST00000522122 CAMTA2O94983 1202 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms