RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 KSR1Q8IVT5 923 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 SLC17A8Q8NDX2 589 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 ZNF507Q8TCN5 953 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 LMBR1Q8WVP7 490 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 PSPC1Q8WXF1 523 aaKnown RBP23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 KIFC3Q9BVG8 833 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 MCOLN1Q9GZU1 580 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 KCNG1Q9UIX4 513 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 MYH9P35579 1960 aaKnown RBP23.55■■□□□ 1.36
R3HCC1-208ENST00000522012 ANKRD40Q6AI12 368 aa23.55■■□□□ 1.36
R3HCC1-208ENST00000522012 CENPPQ6IPU0 288 aa23.55■■□□□ 1.36
R3HCC1-208ENST00000522012 NTPCRQ9BSD7 190 aaKnown RBP23.55■■□□□ 1.36
R3HCC1-208ENST00000522012 NFE2L3Q9Y4A8 694 aa23.55■■□□□ 1.36
R3HCC1-208ENST00000522012 LRRIQ4A6NIV6 560 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 TMOD1P28289 359 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 NAMPTP43490 491 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 ALCAMQ13740 583 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 MTFR1Q15390 333 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 KNOP1Q1ED39 458 aaKnown RBP23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 BMT2Q1RMZ1 405 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 NBPF20Q3BBV1 942 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 NFRKBQ6P4R8 1299 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 DEPTORQ8TB45 409 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 TSG101Q99816 390 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 FANCLQ9NW38 375 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 HDAC6Q9UBN7 1215 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 WDR81Q562E7 1941 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 C17orf102A2RUQ5 167 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 CCL5P13501 91 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 HOXD13P35453 343 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 KCNA1Q09470 495 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 LAMTOR4Q0VGL1 99 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 MXD4Q14582 209 aaPredicted RBP23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 TTI2Q6NXR4 508 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 FBXO46Q6PJ61 603 aaPredicted RBP23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 RHPN2Q8IUC4 686 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 ARRDC4Q8NCT1 418 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 TMEM161BQ8NDZ6 487 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 VTI1AQ96AJ9 217 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 STRA6Q9BX79 667 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 ST6GALNAC4Q9H4F1 302 aa23.54■■□□□ 1.36
R3HCC1-208ENST00000522012 PPP1R37O75864 691 aa23.53■■□□□ 1.36
R3HCC1-208ENST00000522012 GJB1P08034 283 aa23.53■■□□□ 1.36
R3HCC1-208ENST00000522012 GNAT1P11488 350 aa23.53■■□□□ 1.36
R3HCC1-208ENST00000522012 GTF2BQ00403 316 aa23.53■■□□□ 1.36
R3HCC1-208ENST00000522012 PLCB2Q00722 1185 aa23.53■■□□□ 1.36
R3HCC1-208ENST00000522012 CAPSQ13938 189 aa23.53■■□□□ 1.36
R3HCC1-208ENST00000522012 RNF208Q9H0X6 261 aa23.53■■□□□ 1.36
R3HCC1-208ENST00000522012 KCTD10Q9H3F6 313 aa23.53■■□□□ 1.36
R3HCC1-208ENST00000522012 AKT3Q9Y243 479 aa23.53■■□□□ 1.36
R3HCC1-208ENST00000522012 UBE4BO95155 1302 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 ARID2Q68CP9 1835 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 DENND3A2RUS2 1198 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 H0YCG3 227 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 SRGAP2CP0DJJ0 459 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 ACLYP53396 1101 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 MLLT1Q03111 559 aaPredicted RBP23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 LRRC63Q05C16 580 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 HIC1Q14526 733 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 FAM47CQ5HY64 1035 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 SYCP3Q8IZU3 236 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 LINC01465Q8N7H1 131 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 DEFB118Q96PH6 123 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 ACCSQ96QU6 501 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 DUSP9Q99956 384 aaKnown RBP23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 PAK6Q9NQU5 681 aaPredicted RBP23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 SAMSN1Q9NSI8 373 aaKnown RBP23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 ADGRA3Q8IWK6 1321 aa23.52■■□□□ 1.36
R3HCC1-208ENST00000522012 ASAP2O43150 1006 aa23.51■■□□□ 1.35
R3HCC1-208ENST00000522012 CABYRO75952 493 aa23.51■■□□□ 1.35
R3HCC1-208ENST00000522012 RGS19P49795 217 aa23.51■■□□□ 1.35
R3HCC1-208ENST00000522012 ZNF200P98182 395 aaPredicted RBP23.51■■□□□ 1.35
R3HCC1-208ENST00000522012 TFDP1Q14186 410 aa23.51■■□□□ 1.35
R3HCC1-208ENST00000522012 PKN2Q16513 984 aaKnown RBP23.51■■□□□ 1.35
R3HCC1-208ENST00000522012 HSP90AA4PQ58FG1 418 aa23.51■■□□□ 1.35
R3HCC1-208ENST00000522012 CSGALNACT2Q8N6G5 542 aa23.51■■□□□ 1.35
R3HCC1-208ENST00000522012 RNF149Q8NC42 400 aa23.51■■□□□ 1.35
R3HCC1-208ENST00000522012 MAP7D2Q96T17 732 aa23.51■■□□□ 1.35
R3HCC1-208ENST00000522012 TSEN34Q9BSV6 310 aaKnown RBP23.51■■□□□ 1.35
R3HCC1-208ENST00000522012 MBLAC1A4D2B0 266 aaPredicted RBP23.5■■□□□ 1.35
R3HCC1-208ENST00000522012 MOXD2PA6NHM9 499 aa23.5■■□□□ 1.35
R3HCC1-208ENST00000522012 CYP2C9P11712 490 aa23.5■■□□□ 1.35
R3HCC1-208ENST00000522012 KIAA0319LQ8IZA0 1049 aa23.5■■□□□ 1.35
R3HCC1-208ENST00000522012 ZNF668Q96K58 619 aaPredicted RBP23.5■■□□□ 1.35
R3HCC1-208ENST00000522012 NLRP4Q96MN2 994 aa23.5■■□□□ 1.35
R3HCC1-208ENST00000522012 SRRTQ9BXP5 876 aaKnown RBP23.5■■□□□ 1.35
R3HCC1-208ENST00000522012 HSD3B7Q9H2F3 369 aa23.5■■□□□ 1.35
R3HCC1-208ENST00000522012 TMEM206Q9H813 350 aa23.5■■□□□ 1.35
R3HCC1-208ENST00000522012 ARHGAP28Q9P2N2 729 aa23.5■■□□□ 1.35
R3HCC1-208ENST00000522012 TBX20Q9UMR3 447 aa23.5■■□□□ 1.35
R3HCC1-208ENST00000522012 PDXKO00764 312 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 TREHO43280 583 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 CALUO43852 315 aaPredicted RBP23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 VTNP04004 478 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 ADAM17P78536 824 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 ZCWPW2Q504Y3 356 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 HVCN1Q96D96 273 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 FAM49AQ9H0Q0 323 aaPredicted RBP23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 IKZF4Q9H2S9 585 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 TYW1Q9NV66 732 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms