RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 GLRX3O76003 335 aaKnown RBP4.55□□□□□ -1.68
VPS13B-209ENST00000521559 MRE11P49959 708 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 ADCY1Q08828 1119 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 PABPC4Q13310 644 aaKnown RBP eCLIP4.55□□□□□ -1.68
VPS13B-209ENST00000521559 PCOLCEQ15113 449 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 PRKD1Q15139 912 aaPredicted RBP4.55□□□□□ -1.68
VPS13B-209ENST00000521559 RNF151Q2KHN1 245 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 CFAP100Q494V2 611 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 PIK3R6Q5UE93 754 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 ZNF585AQ6P3V2 769 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 FILIP1Q7Z7B0 1213 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 SH3RF3Q8TEJ3 882 aaPredicted RBP4.55□□□□□ -1.68
VPS13B-209ENST00000521559 APPBP2Q92624 585 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 FAM89AQ96GI7 184 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 GNRHR2Q96P88 292 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 NELFAQ9H3P2 528 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 B4GALT6Q9UBX8 382 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 FAM184BQ9ULE4 1060 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 ZKSCAN5Q9Y2L8 839 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 ARHGEF5Q12774 1597 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 ZMYM4Q5VZL5 1548 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 CDC42BPAQ5VT25 1732 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 NCOA1Q15788 1441 aa4.55□□□□□ -1.68
VPS13B-209ENST00000521559 ITSN2Q9NZM3 1697 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 TSPOAP1O95153 1857 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 KDM5CP41229 1560 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 FRMPD1Q5SYB0 1578 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 PMS2P1A4D2B8 440 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 RASSF10A6NK89 507 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 PPP1R12AO14974 1030 aaPredicted RBP4.54□□□□□ -1.68
VPS13B-209ENST00000521559 KIF3BO15066 747 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 FOXS1O43638 330 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 CDC14BO60729 498 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 H2AFYO75367 372 aaKnown RBP4.54□□□□□ -1.68
VPS13B-209ENST00000521559 RAD17O75943 681 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 JMJD7P0C870 316 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 COMTP21964 271 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 TM4SF20Q53R12 229 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 TTC38Q5R3I4 469 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 CDCA2Q69YH5 1023 aaPredicted RBP4.54□□□□□ -1.68
VPS13B-209ENST00000521559 LARP4Q71RC2 724 aaKnown RBP eCLIP4.54□□□□□ -1.68
VPS13B-209ENST00000521559 POLNQ7Z5Q5 900 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 KIF18BQ86Y91 864 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 ZZZ3Q8IYH5 903 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 RPGRQ92834 1020 aaKnown RBP4.54□□□□□ -1.68
VPS13B-209ENST00000521559 GFM2Q969S9 779 aaKnown RBP4.54□□□□□ -1.68
VPS13B-209ENST00000521559 FOXRED1Q96CU9 486 aaPredicted RBP4.54□□□□□ -1.68
VPS13B-209ENST00000521559 MAML3Q96JK9 1138 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 IFT57Q9NWB7 429 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 SAE1Q9UBE0 346 aaPredicted RBP4.54□□□□□ -1.68
VPS13B-209ENST00000521559 ZFYVE16Q7Z3T8 1539 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 SHANK2Q9UPX8 1470 aa4.54□□□□□ -1.68
VPS13B-209ENST00000521559 KIF15Q9NS87 1388 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 UBA6A0AVT1 1052 aaPredicted RBP4.53□□□□□ -1.68
VPS13B-209ENST00000521559 CBX4O00257 560 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 TRAF5O00463 557 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 MATN3O15232 486 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 TNFRSF1AP19438 455 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 SLC6A3Q01959 620 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 EPHA7Q15375 998 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 DGKDQ16760 1214 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 FSTL4Q6MZW2 842 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 TIGD7Q6NT04 549 aaPredicted RBP4.53□□□□□ -1.68
VPS13B-209ENST00000521559 GGT6Q6P531 493 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 KLHDC10Q6PID8 442 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 C16orf86Q6ZW13 317 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 RTN4RL1Q86UN2 441 aaPredicted RBP4.53□□□□□ -1.68
VPS13B-209ENST00000521559 PASD1Q8IV76 773 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 KIAA1958Q8N8K9 716 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 EDAQ92838 391 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 ORAI3Q9BRQ5 295 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 KIAA1683Q9H0B3 1180 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 USP35Q9P2H5 1018 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 SYNPO2Q9UMS6 1093 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 SLC30A1Q9Y6M5 507 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 A2MP01023 1474 aa4.53□□□□□ -1.68
VPS13B-209ENST00000521559 ATP7AQ04656 1500 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 ADGRL2O95490 1459 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 GAS7O60861 476 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 PRLP01236 227 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 SDSP20132 328 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 STAT5BP51692 787 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 NEK4P51957 841 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 BCAR1P56945 870 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 ZXDAP98168 799 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 HHEXQ03014 270 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 ZNF460Q14592 562 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 NOLC1Q14978 699 aaKnown RBP eCLIP4.52□□□□□ -1.69
VPS13B-209ENST00000521559 CDSNQ15517 529 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 SLFN12LQ6IEE8 588 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 USP51Q70EK9 711 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 PALM2Q8IXS6 379 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 FUKQ8N0W3 1084 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 AHI1Q8N157 1196 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 RNPC3Q96LT9 517 aaKnown RBP4.52□□□□□ -1.69
VPS13B-209ENST00000521559 WWC2-AS2Q96NR7 200 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 OR14A2Q96R54 314 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 TUBGCP5Q96RT8 1024 aa4.52□□□□□ -1.69
VPS13B-209ENST00000521559 ADOQ96SZ5 270 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms