RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 FOSBP53539 338 aa22.96■■□□□ 1.27
SNHG6-203ENST00000520944 ADAM15Q13444 863 aa22.96■■□□□ 1.27
SNHG6-203ENST00000520944 C4orf19Q8IY42 314 aa22.96■■□□□ 1.27
SNHG6-203ENST00000520944 DIS3L2Q8IYB7 885 aaKnown RBP22.96■■□□□ 1.27
SNHG6-203ENST00000520944 NLRP4Q96MN2 994 aa22.96■■□□□ 1.27
SNHG6-203ENST00000520944 CWH43Q9H720 699 aa22.96■■□□□ 1.27
SNHG6-203ENST00000520944 TLR9Q9NR96 1032 aa22.96■■□□□ 1.27
SNHG6-203ENST00000520944 PUF60Q9UHX1 559 aaKnown RBP22.96■■□□□ 1.27
SNHG6-203ENST00000520944 PCDHA12Q9UN75 941 aa22.96■■□□□ 1.27
SNHG6-203ENST00000520944 NRIP1P48552 1158 aa22.95■■□□□ 1.26
SNHG6-203ENST00000520944 NDUFV1P49821 464 aa22.95■■□□□ 1.26
SNHG6-203ENST00000520944 SAFBQ15424 915 aaKnown RBP eCLIP22.95■■□□□ 1.26
SNHG6-203ENST00000520944 CLUL1Q15846 466 aa22.95■■□□□ 1.26
SNHG6-203ENST00000520944 CALCRLQ16602 461 aa22.95■■□□□ 1.26
SNHG6-203ENST00000520944 RBM23Q86U06 439 aaKnown RBP22.95■■□□□ 1.26
SNHG6-203ENST00000520944 KSR1Q8IVT5 923 aa22.95■■□□□ 1.26
SNHG6-203ENST00000520944 TPH2Q8IWU9 490 aa22.95■■□□□ 1.26
SNHG6-203ENST00000520944 LRRC43Q8N309 656 aa22.95■■□□□ 1.26
SNHG6-203ENST00000520944 DYDC2Q96IM9 177 aa22.95■■□□□ 1.26
SNHG6-203ENST00000520944 TLE6Q9H808 572 aa22.95■■□□□ 1.26
SNHG6-203ENST00000520944 RGL1Q9NZL6 768 aa22.95■■□□□ 1.26
SNHG6-203ENST00000520944 WRAP73Q9P2S5 460 aaPredicted RBP22.95■■□□□ 1.26
SNHG6-203ENST00000520944 HCSTQ9UBK5 93 aa22.95■■□□□ 1.26
SNHG6-203ENST00000520944 LIMCH1Q9UPQ0 1083 aa22.95■■□□□ 1.26
SNHG6-203ENST00000520944 SKIP12755 728 aa22.94■■□□□ 1.26
SNHG6-203ENST00000520944 CYP4A11Q02928 519 aa22.94■■□□□ 1.26
SNHG6-203ENST00000520944 KRT17Q04695 432 aa22.94■■□□□ 1.26
SNHG6-203ENST00000520944 DLX2Q07687 328 aaPredicted RBP22.94■■□□□ 1.26
SNHG6-203ENST00000520944 CTTNQ14247 550 aaKnown RBP22.94■■□□□ 1.26
SNHG6-203ENST00000520944 TWF2Q6IBS0 349 aaKnown RBP22.94■■□□□ 1.26
SNHG6-203ENST00000520944 PDE12Q6L8Q7 609 aaKnown RBP22.94■■□□□ 1.26
SNHG6-203ENST00000520944 LRRC55Q6ZSA7 311 aa22.94■■□□□ 1.26
SNHG6-203ENST00000520944 CATSPER4Q7RTX7 472 aa22.94■■□□□ 1.26
SNHG6-203ENST00000520944 ADGRD2Q7Z7M1 963 aa22.94■■□□□ 1.26
SNHG6-203ENST00000520944 ZNF579Q8NAF0 562 aaKnown RBP22.94■■□□□ 1.26
SNHG6-203ENST00000520944 PSPC1Q8WXF1 523 aaKnown RBP22.94■■□□□ 1.26
SNHG6-203ENST00000520944 EPHX3Q9H6B9 360 aa22.94■■□□□ 1.26
SNHG6-203ENST00000520944 CD320Q9NPF0 282 aa22.94■■□□□ 1.26
SNHG6-203ENST00000520944 RNF19AQ9NV58 838 aa22.94■■□□□ 1.26
SNHG6-203ENST00000520944 PRKAG3Q9UGI9 489 aa22.94■■□□□ 1.26
SNHG6-203ENST00000520944 PIN4Q9Y237 131 aaKnown RBP22.94■■□□□ 1.26
SNHG6-203ENST00000520944 COL4A3BPQ9Y5P4 624 aa22.94■■□□□ 1.26
SNHG6-203ENST00000520944 LINC01565O15544 149 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 NEMFO60524 1076 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 COL9A1P20849 921 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 PHKA2P46019 1235 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 SPIRE1Q08AE8 756 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 XKR9Q5GH70 373 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 KCNT2Q6UVM3 1135 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 EFHBQ8N7U6 833 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 TCP11Q8WWU5 503 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 PRPF31Q8WWY3 499 aaKnown RBP22.93■■□□□ 1.26
SNHG6-203ENST00000520944 TMEM143Q96AN5 459 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 ZNF558Q96NG5 402 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 TRAIPQ9BWF2 469 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 DHX33Q9H6R0 707 aaKnown RBP22.93■■□□□ 1.26
SNHG6-203ENST00000520944 CD207Q9UJ71 328 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 LZTS1Q9Y250 596 aa22.93■■□□□ 1.26
SNHG6-203ENST00000520944 GAS2O43903 313 aaKnown RBP22.92■■□□□ 1.26
SNHG6-203ENST00000520944 SRGAP2CP0DJJ0 459 aa22.92■■□□□ 1.26
SNHG6-203ENST00000520944 PPM1AP35813 382 aa22.92■■□□□ 1.26
SNHG6-203ENST00000520944 PLCB3Q01970 1234 aa22.92■■□□□ 1.26
SNHG6-203ENST00000520944 CLLU1OSQ5K130 101 aa22.92■■□□□ 1.26
SNHG6-203ENST00000520944 ZNF598Q86UK7 904 aaKnown RBP22.92■■□□□ 1.26
SNHG6-203ENST00000520944 HELQQ8TDG4 1101 aa22.92■■□□□ 1.26
SNHG6-203ENST00000520944 MRPS27Q92552 414 aaKnown RBP22.92■■□□□ 1.26
SNHG6-203ENST00000520944 EIF2AK1Q9BQI3 630 aaKnown RBP22.92■■□□□ 1.26
SNHG6-203ENST00000520944 MRPL9Q9BYD2 267 aaKnown RBP22.92■■□□□ 1.26
SNHG6-203ENST00000520944 TTC12Q9H892 705 aaPredicted RBP22.92■■□□□ 1.26
SNHG6-203ENST00000520944 WDR81Q562E7 1941 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 FSD2A1L4K1 749 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 ASAP2O43150 1006 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 TBX10O75333 385 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 SLITRK3O94933 977 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 TXKP42681 527 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 ERVFC1P60507 584 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 LAMTOR4Q0VGL1 99 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 SRGAP1Q7Z6B7 1085 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 RSPH1Q8WYR4 309 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 IFT122Q9HBG6 1241 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 BMP2KQ9NSY1 1161 aaPredicted RBP22.91■■□□□ 1.26
SNHG6-203ENST00000520944 SPG21Q9NZD8 308 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 PCDHGC5Q9Y5F6 944 aa22.91■■□□□ 1.26
SNHG6-203ENST00000520944 PER2O15055 1255 aa22.9■■□□□ 1.26
SNHG6-203ENST00000520944 MBTPS2O43462 519 aa22.9■■□□□ 1.26
SNHG6-203ENST00000520944 ALDH7A1P49419 539 aaKnown RBP22.9■■□□□ 1.26
SNHG6-203ENST00000520944 RAB27AP51159 221 aa22.9■■□□□ 1.26
SNHG6-203ENST00000520944 SMAD4Q13485 552 aaKnown RBP22.9■■□□□ 1.26
SNHG6-203ENST00000520944 EMC2Q15006 297 aa22.9■■□□□ 1.26
SNHG6-203ENST00000520944 SMAD2Q15796 467 aaKnown RBP22.9■■□□□ 1.26
SNHG6-203ENST00000520944 CCDC83Q8IWF9 413 aa22.9■■□□□ 1.26
SNHG6-203ENST00000520944 ADHFE1Q8IWW8 467 aa22.9■■□□□ 1.26
SNHG6-203ENST00000520944 ZSCAN31Q96LW9 406 aaPredicted RBP22.9■■□□□ 1.26
SNHG6-203ENST00000520944 CCDC43Q96MW1 224 aaKnown RBP22.9■■□□□ 1.26
SNHG6-203ENST00000520944 CDCA3Q99618 268 aaPredicted RBP22.9■■□□□ 1.26
SNHG6-203ENST00000520944 MTRQ99707 1265 aa22.9■■□□□ 1.26
SNHG6-203ENST00000520944 LLPHQ9BRT6 129 aaKnown RBP22.9■■□□□ 1.26
SNHG6-203ENST00000520944 C5orf42Q9H799 3197 aa22.89■■□□□ 1.26
SNHG6-203ENST00000520944 PI4K2BG5E9Z4 385 aa22.89■■□□□ 1.25
SNHG6-203ENST00000520944 ZBTB39O15060 712 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms