RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 TPH2Q8IWU9 490 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 ADGRF4Q8IZF3 695 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 HAS1Q92839 578 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 ARHGEF26Q96DR7 871 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 AGAP1Q9UPQ3 857 aa13.83□□□□□ -0.2
TRAPPC9-208ENST00000520857 PASKQ96RG2 1323 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 ASAP2O43150 1006 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 NEFHP12036 1026 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 BRAFP15056 766 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 ORC2Q13416 577 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 SLMAPQ14BN4 828 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 TNIP1Q15025 636 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 CCDC6Q16204 474 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 NSMFQ6X4W1 530 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 SRP68Q9UHB9 627 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 PNMA3Q9UL41 463 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 THRAP3Q9Y2W1 955 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 TIAM2Q8IVF5 1701 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 PNMA6FA0A0J9YX94 578 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 C6orf229H3BNL8 230 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 ATMINO43313 823 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 PAEPP09466 180 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 RPL21P46778 160 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 DHX34Q14147 1143 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 SF3B3Q15393 1217 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 ASPRV1Q53RT3 343 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 MFSD14BQ5SR56 506 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 SPATA21Q7Z572 469 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 SLC17A8Q8NDX2 589 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 TGS1Q96RS0 853 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 AJAP1Q9UKB5 411 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 G3V3G9 751 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 PPP1R12AO14974 1030 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 FTLP02792 175 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 GSTA1P08263 222 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 PSMC2P35998 433 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 CETN1Q12798 172 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 SEPT7Q16181 437 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 DCAF8Q5TAQ9 597 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 ERICH1Q86X53 443 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 TLCD1Q96CP7 247 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 RUNDC3BQ96NL0 473 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 PPP1R12CQ9BZL4 782 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 CARD9Q9H257 536 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 KCTD10Q9H3F6 313 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 TAS2R14Q9NYV8 317 aa13.82□□□□□ -0.2
TRAPPC9-208ENST00000520857 ATP2A2P16615 1042 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 NMT1P30419 496 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 TBC1D9BQ66K14 1250 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 CYP4F22Q6NT55 531 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 C1orf54Q8WWF1 131 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 ATP5DP30049 168 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 GBP1P32455 592 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 MMP13P45452 471 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 MARCKSL1P49006 195 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 CCNHP51946 323 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 COPS2P61201 443 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 GNPTABQ3T906 1256 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 ZC2HC1CQ53FD0 456 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 DUPD1Q68J44 220 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 SEPT14Q6ZU15 432 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 PHLDB2Q86SQ0 1253 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 ALG3Q92685 438 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 KRT35Q92764 455 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 PGM2Q96G03 612 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 TYW1Q9NV66 732 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 CASZ1Q86V15 1759 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 MYH7BA7E2Y1 1941 aa13.81□□□□□ -0.2
TRAPPC9-208ENST00000520857 ESYT2A0FGR8 921 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 PODXLO00592 558 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 SNX3O60493 162 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 UFL1O94874 794 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 ECEL1O95672 775 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 AKR1B1P15121 316 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 CHRNA3P32297 505 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 TBC1D10BQ4KMP7 808 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 LNX1Q8TBB1 728 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 HES6Q96HZ4 224 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 ZNF317Q96PQ6 595 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 DDX23Q9BUQ8 820 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 ANO3Q9BYT9 981 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 ADAM33Q9BZ11 813 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 UBE2TQ9NPD8 197 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 RABGAP1Q9Y3P9 1069 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 SYNGAP1Q96PV0 1343 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 KIAA0391O15091 583 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 PHF2O75151 1096 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 KRT16P08779 473 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 CHRM1P11229 460 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 ADCY8P40145 1251 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 MSH2P43246 934 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 MYL7Q01449 175 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 BZW1Q7L1Q6 419 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 GBP7Q8N8V2 638 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 SLC35C1Q96A29 364 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 CCDC77Q9BR77 488 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 PCIF1Q9H4Z3 704 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 BCAS3Q9H6U6 928 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 BATF3Q9NR55 127 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms