RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 ZNF668Q96K58 619 aaPredicted RBP16.97■□□□□ 0.31
LSM1-203ENST00000520755 POLD4Q9HCU8 107 aa16.97■□□□□ 0.31
LSM1-203ENST00000520755 GPRC5CQ9NQ84 441 aa16.97■□□□□ 0.31
LSM1-203ENST00000520755 KCND2Q9NZV8 630 aa16.97■□□□□ 0.31
LSM1-203ENST00000520755 TRPV2Q9Y5S1 764 aa16.97■□□□□ 0.31
LSM1-203ENST00000520755 GAS2O43903 313 aaKnown RBP16.96■□□□□ 0.31
LSM1-203ENST00000520755 HIP1RO75146 1068 aa16.96■□□□□ 0.31
LSM1-203ENST00000520755 ASIC1P78348 528 aa16.96■□□□□ 0.31
LSM1-203ENST00000520755 EHHADHQ08426 723 aa16.96■□□□□ 0.31
LSM1-203ENST00000520755 MGAT3Q09327 533 aa16.96■□□□□ 0.31
LSM1-203ENST00000520755 MBTPS1Q14703 1052 aa16.96■□□□□ 0.31
LSM1-203ENST00000520755 KIZQ2M2Z5 673 aa16.96■□□□□ 0.31
LSM1-203ENST00000520755 FAM26DQ5JW98 314 aa16.96■□□□□ 0.31
LSM1-203ENST00000520755 FAM102BQ5T8I3 360 aa16.96■□□□□ 0.31
LSM1-203ENST00000520755 RHPN2Q8IUC4 686 aa16.96■□□□□ 0.31
LSM1-203ENST00000520755 MCPH1Q8NEM0 835 aa16.96■□□□□ 0.31
LSM1-203ENST00000520755 TCP11Q8WWU5 503 aa16.96■□□□□ 0.31
LSM1-203ENST00000520755 PSPC1Q8WXF1 523 aaKnown RBP16.96■□□□□ 0.31
LSM1-203ENST00000520755 SCLT1Q96NL6 688 aa16.96■□□□□ 0.31
LSM1-203ENST00000520755 CELF4Q9BZC1 486 aaKnown RBP16.96■□□□□ 0.31
LSM1-203ENST00000520755 TET1Q8NFU7 2136 aa16.96■□□□□ 0.3
LSM1-203ENST00000520755 NBNO60934 754 aa16.95■□□□□ 0.3
LSM1-203ENST00000520755 MYL1P05976 194 aa16.95■□□□□ 0.3
LSM1-203ENST00000520755 RFC2P35250 354 aa16.95■□□□□ 0.3
LSM1-203ENST00000520755 ZNF131P52739 623 aa16.95■□□□□ 0.3
LSM1-203ENST00000520755 NLRP11P59045 1033 aaKnown RBP16.95■□□□□ 0.3
LSM1-203ENST00000520755 PPIGQ13427 754 aaKnown RBP eCLIP16.95■□□□□ 0.3
LSM1-203ENST00000520755 KSR1Q8IVT5 923 aa16.95■□□□□ 0.3
LSM1-203ENST00000520755 PRPF31Q8WWY3 499 aaKnown RBP16.95■□□□□ 0.3
LSM1-203ENST00000520755 NLRP7Q8WX94 980 aa16.95■□□□□ 0.3
LSM1-203ENST00000520755 BSNDQ8WZ55 320 aa16.95■□□□□ 0.3
LSM1-203ENST00000520755 OSMRQ99650 979 aa16.95■□□□□ 0.3
LSM1-203ENST00000520755 POLR3FQ9H1D9 316 aaPredicted RBP16.95■□□□□ 0.3
LSM1-203ENST00000520755 ODF2LQ9ULJ1 636 aa16.95■□□□□ 0.3
LSM1-203ENST00000520755 PCDHA5Q9Y5H7 936 aa16.95■□□□□ 0.3
LSM1-203ENST00000520755 COL4A3BPQ9Y5P4 624 aa16.95■□□□□ 0.3
LSM1-203ENST00000520755 GPR32O75388 356 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 PARNO95453 639 aaKnown RBP16.94■□□□□ 0.3
LSM1-203ENST00000520755 ACRP10323 421 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 GHRP10912 638 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 SARSP49591 514 aaKnown RBP16.94■□□□□ 0.3
LSM1-203ENST00000520755 GPC3P51654 580 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 AMPD3Q01432 767 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 COASYQ13057 564 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 NT5DC1Q5TFE4 455 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 UNC13DQ70J99 1090 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 ASAP3Q8TDY4 903 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 NLRP4Q96MN2 994 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 TIPINQ9BVW5 301 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 FGFBP2Q9BYJ0 223 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 OSBPL7Q9BZF2 842 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 CDHR5Q9HBB8 845 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 IL23AQ9NPF7 189 aa16.94■□□□□ 0.3
LSM1-203ENST00000520755 RPN1P04843 607 aaKnown RBP16.93■□□□□ 0.3
LSM1-203ENST00000520755 KRT18P05783 430 aaKnown RBP16.93■□□□□ 0.3
LSM1-203ENST00000520755 SRGAP2CP0DJJ0 459 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 ARL2P36404 184 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 CRYBB1P53674 252 aaPredicted RBP16.93■□□□□ 0.3
LSM1-203ENST00000520755 EPHB4P54760 987 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 LAMTOR4Q0VGL1 99 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 LPIN1Q14693 890 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 GPNMBQ14956 572 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 KMT5BQ4FZB7 885 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 FBXO47Q5MNV8 452 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 SFR1Q86XK3 245 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 RPUSD2Q8IZ73 545 aaKnown RBP16.93■□□□□ 0.3
LSM1-203ENST00000520755 HPS3Q969F9 1004 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 FIZ1Q96SL8 496 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 LRRC27Q9C0I9 530 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 KIAA1468Q9P260 1216 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 MAN1B1Q9UKM7 699 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 CEP290O15078 2479 aa16.93■□□□□ 0.3
LSM1-203ENST00000520755 A0A087WZ62 844 aa16.92■□□□□ 0.3
LSM1-203ENST00000520755 SFI1A8K8P3 1242 aa16.92■□□□□ 0.3
LSM1-203ENST00000520755 IDEP14735 1019 aa16.92■□□□□ 0.3
LSM1-203ENST00000520755 GLRA2P23416 452 aa16.92■□□□□ 0.3
LSM1-203ENST00000520755 CDC42EP1Q00587 391 aa16.92■□□□□ 0.3
LSM1-203ENST00000520755 MXD4Q14582 209 aaPredicted RBP16.92■□□□□ 0.3
LSM1-203ENST00000520755 SMARCE1Q969G3 411 aa16.92■□□□□ 0.3
LSM1-203ENST00000520755 SYAP1Q96A49 352 aaPredicted RBP16.92■□□□□ 0.3
LSM1-203ENST00000520755 CCDC34Q96HJ3 373 aa16.92■□□□□ 0.3
LSM1-203ENST00000520755 GDF15Q99988 308 aa16.92■□□□□ 0.3
LSM1-203ENST00000520755 FDXACB1Q9BRP7 624 aaPredicted RBP16.92■□□□□ 0.3
LSM1-203ENST00000520755 UBE2OQ9C0C9 1292 aaKnown RBP16.92■□□□□ 0.3
LSM1-203ENST00000520755 ADAMTS10Q9H324 1103 aa16.92■□□□□ 0.3
LSM1-203ENST00000520755 PANK4Q9NVE7 773 aa16.92■□□□□ 0.3
LSM1-203ENST00000520755 HOOK1Q9UJC3 728 aaKnown RBP16.92■□□□□ 0.3
LSM1-203ENST00000520755 ADGRA3Q8IWK6 1321 aa16.92■□□□□ 0.3
LSM1-203ENST00000520755 MICAL3Q7RTP6 2002 aa16.91■□□□□ 0.3
LSM1-203ENST00000520755 PVALEFA0A1B0GWK0 134 aa16.91■□□□□ 0.3
LSM1-203ENST00000520755 ASAP2O43150 1006 aa16.91■□□□□ 0.3
LSM1-203ENST00000520755 TBCAO75347 108 aaKnown RBP16.91■□□□□ 0.3
LSM1-203ENST00000520755 RHOBTB3O94955 611 aa16.91■□□□□ 0.3
LSM1-203ENST00000520755 FAM13AO94988 1023 aa16.91■□□□□ 0.3
LSM1-203ENST00000520755 CXCL10P02778 98 aa16.91■□□□□ 0.3
LSM1-203ENST00000520755 BMP6P22004 513 aa16.91■□□□□ 0.3
LSM1-203ENST00000520755 CAPSQ13938 189 aa16.91■□□□□ 0.3
LSM1-203ENST00000520755 TFDP1Q14186 410 aa16.91■□□□□ 0.3
LSM1-203ENST00000520755 KCNB1Q14721 858 aa16.91■□□□□ 0.3
LSM1-203ENST00000520755 ZSCAN23Q3MJ62 389 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms