RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 PUS3Q9BZE2 481 aaKnown RBP9.39□□□□□ -0.91
SHPRH-208ENST00000520752 HELLSQ9NRZ9 838 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 FANCLQ9NW38 375 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 TBC1D7Q9P0N9 293 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 ANKARQ7Z5J8 1434 aa9.39□□□□□ -0.91
SHPRH-208ENST00000520752 PNPLA6Q8IY17 1366 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 TMEM247A6NEH6 219 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 FAM229AH3BQW9 127 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 HIP1O00291 1037 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 P4HA2O15460 535 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 TIMM44O43615 452 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 STRNO43815 780 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 KDM1AO60341 852 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 PAGE1O75459 146 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 RAPGEF3O95398 923 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 MAP4K4O95819 1239 aaPredicted RBP9.38□□□□□ -0.91
SHPRH-208ENST00000520752 TCF3P15923 654 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 XBP1P17861 261 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 BMP6P22004 513 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 S100A1P23297 94 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 ARNTP27540 789 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 CCT4P50991 539 aaKnown RBP9.38□□□□□ -0.91
SHPRH-208ENST00000520752 ARPC4P59998 168 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 GSTA3Q16772 222 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 CCDC152Q4G0S7 254 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 SLC44A4Q53GD3 710 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 CFAP157Q5JU67 520 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 TMEM154Q6P9G4 183 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 C3orf62Q6ZUJ4 267 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 HS2ST1Q7LGA3 356 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 ERMP1Q7Z2K6 904 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 LINS1Q8NG48 757 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 PPP1R14CQ8TAE6 165 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 ENOX1Q8TC92 643 aaKnown RBP9.38□□□□□ -0.91
SHPRH-208ENST00000520752 RNF34Q969K3 372 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 SNX27Q96L92 541 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 OLFM3Q96PB7 478 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 GBP5Q96PP8 586 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 CTAGE1Q96RT6 745 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 SH3GL1Q99961 368 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 RETREG1Q9H6L5 497 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 LZTFL1Q9NQ48 299 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 KCNK4Q9NYG8 393 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 HMG20BQ9P0W2 317 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 MRC2Q9UBG0 1479 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 BCL9O00512 1426 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 POGZQ7Z3K3 1410 aa9.38□□□□□ -0.91
SHPRH-208ENST00000520752 MAP3K15Q6ZN16 1313 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 QRICH2Q9H0J4 1663 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 FAM237AA0A1B0GTK4 181 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 A0A1B0GVG6 124 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 MAGEA13PA6NCF6 341 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 TTI1O43156 1089 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 ADAM11O75078 769 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 ALDH1L1O75891 902 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 EIF2S1P05198 315 aaKnown RBP9.37□□□□□ -0.91
SHPRH-208ENST00000520752 GNAZP19086 355 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 CALB2P22676 271 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 CMA1P23946 247 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 MLH1P40692 756 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 RPS26P62854 115 aaKnown RBP9.37□□□□□ -0.91
SHPRH-208ENST00000520752 SLC7A5Q01650 507 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 GUCY1A3Q02108 690 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 KRT32Q14532 448 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 KPNB1Q14974 876 aaKnown RBP9.37□□□□□ -0.91
SHPRH-208ENST00000520752 NR1I3Q14994 352 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 ZNF394Q53GI3 561 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 TBC1D9BQ66K14 1250 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 NCAPH2Q6IBW4 605 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 GALNT17Q6IS24 598 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 FAM173BQ6P4H8 233 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 CYP26C1Q6V0L0 522 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 RAD9BQ6WBX8 426 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 PNMA8AQ86V59 439 aaPredicted RBP9.37□□□□□ -0.91
SHPRH-208ENST00000520752 METTL16Q86W50 562 aaKnown RBP9.37□□□□□ -0.91
SHPRH-208ENST00000520752 SULF2Q8IWU5 870 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 IFT20Q8IY31 132 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 USP33Q8TEY7 942 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 DPF2Q92785 391 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 HIC2Q96JB3 615 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 ZIM3Q96PE6 472 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 EMILIN2Q9BXX0 1053 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 NSRP1Q9H0G5 558 aaKnown RBP9.37□□□□□ -0.91
SHPRH-208ENST00000520752 RAB17Q9H0T7 212 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 TMBIM4Q9HC24 238 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 PANK4Q9NVE7 773 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 RNF14Q9UBS8 474 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 LRCH1Q9Y2L9 728 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 NR2E3Q9Y5X4 410 aa9.37□□□□□ -0.91
SHPRH-208ENST00000520752 USP42Q9H9J4 1324 aaKnown RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 RNF225M0QZC1 329 aaPredicted RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 DDX3YO15523 660 aaKnown RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 ATP5HO75947 161 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 ZNF18P17022 549 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 DRD4P21917 467 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 HOXD12P35452 270 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 TCF7P36402 384 aaPredicted RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 ME1P48163 572 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 PEX5P50542 639 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 ITGA9Q13797 1035 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms