RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 CBWD1Q9BRT8 395 aa11□□□□□ -0.65
MCF2-209ENST00000520602 HSPBP1Q9NZL4 362 aa11□□□□□ -0.65
MCF2-209ENST00000520602 CHORDC1Q9UHD1 332 aaPredicted RBP11□□□□□ -0.65
MCF2-209ENST00000520602 TRPC6Q9Y210 931 aa11□□□□□ -0.65
MCF2-209ENST00000520602 BTAF1O14981 1849 aa11□□□□□ -0.65
MCF2-209ENST00000520602 CD19P15391 556 aa11□□□□□ -0.65
MCF2-209ENST00000520602 SFNP31947 248 aa11□□□□□ -0.65
MCF2-209ENST00000520602 GALCP54803 685 aa11□□□□□ -0.65
MCF2-209ENST00000520602 CDK17Q00537 523 aa11□□□□□ -0.65
MCF2-209ENST00000520602 KIAA1755Q5JYT7 1200 aa11□□□□□ -0.65
MCF2-209ENST00000520602 MED4Q9NPJ6 270 aa11□□□□□ -0.65
MCF2-209ENST00000520602 RBM12Q9NTZ6 932 aaKnown RBP11□□□□□ -0.65
MCF2-209ENST00000520602 TISP43B9A030 160 aa11□□□□□ -0.65
MCF2-209ENST00000520602 FGGP02679 453 aa11□□□□□ -0.65
MCF2-209ENST00000520602 SRGAP2CP0DJJ0 459 aa11□□□□□ -0.65
MCF2-209ENST00000520602 ALCAMQ13740 583 aa11□□□□□ -0.65
MCF2-209ENST00000520602 CEP85LQ5SZL2 805 aa11□□□□□ -0.65
MCF2-209ENST00000520602 GSTA5Q7RTV2 222 aa11□□□□□ -0.65
MCF2-209ENST00000520602 ZBTB33Q86T24 672 aa11□□□□□ -0.65
MCF2-209ENST00000520602 RIN2Q8WYP3 895 aaPredicted RBP11□□□□□ -0.65
MCF2-209ENST00000520602 SLC5A5Q92911 643 aa11□□□□□ -0.65
MCF2-209ENST00000520602 FUT8Q9BYC5 575 aa11□□□□□ -0.65
MCF2-209ENST00000520602 DDX47Q9H0S4 455 aaKnown RBP11□□□□□ -0.65
MCF2-209ENST00000520602 RANBP17Q9H2T7 1088 aaKnown RBP11□□□□□ -0.65
MCF2-209ENST00000520602 ACAD9Q9H845 621 aa11□□□□□ -0.65
MCF2-209ENST00000520602 RNF14Q9UBS8 474 aa11□□□□□ -0.65
MCF2-209ENST00000520602 PPP1R9AQ9ULJ8 1098 aa11□□□□□ -0.65
MCF2-209ENST00000520602 C4AP0C0L4 1744 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 EIF3DO15371 548 aaKnown RBP eCLIP10.99□□□□□ -0.65
MCF2-209ENST00000520602 PSMD10O75832 226 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 FTLP02792 175 aaPredicted RBP10.99□□□□□ -0.65
MCF2-209ENST00000520602 PLS3P13797 630 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 ITGB5P18084 799 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 PIK3CAP42336 1068 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 EPHB4P54760 987 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 SOX10P56693 466 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 OSTNP61366 133 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 STXBP2Q15833 593 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 PAPD7Q5XG87 772 aaKnown RBP10.99□□□□□ -0.65
MCF2-209ENST00000520602 POTEAQ6S8J7 498 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 ZNF571Q7Z3V5 609 aaPredicted RBP10.99□□□□□ -0.65
MCF2-209ENST00000520602 UHMK1Q8TAS1 419 aaKnown RBP10.99□□□□□ -0.65
MCF2-209ENST00000520602 OTUD5Q96G74 571 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 TEX13BQ9BXU2 312 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 NRBP2Q9NSY0 501 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 NAGPAQ9UK23 515 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 TRAF3IP3Q9Y228 551 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 DDX60Q8IY21 1712 aaKnown RBP10.99□□□□□ -0.65
MCF2-209ENST00000520602 CYP3A4P08684 503 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 VPS41P49754 854 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 NAB2Q15742 525 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 ZSCAN26Q16670 478 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 RPUSD2Q8IZ73 545 aaKnown RBP10.99□□□□□ -0.65
MCF2-209ENST00000520602 DYDC1Q8WWB3 177 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 PPP1R16BQ96T49 567 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 JPH1Q9HDC5 661 aaPredicted RBP10.99□□□□□ -0.65
MCF2-209ENST00000520602 APEX2Q9UBZ4 518 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 TIAM2Q8IVF5 1701 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 ZNF233A6NK53 670 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 MKRN3Q13064 507 aaKnown RBP10.99□□□□□ -0.65
MCF2-209ENST00000520602 PPFIA1Q13136 1202 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 APOBEC3FQ8IUX4 373 aaKnown RBP10.99□□□□□ -0.65
MCF2-209ENST00000520602 SLC35C1Q96A29 364 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 TMEM143Q96AN5 459 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 LRRC45Q96CN5 670 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 HSD17B14Q9BPX1 270 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 STK33Q9BYT3 514 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 KCTD10Q9H3F6 313 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 OLFML3Q9NRN5 406 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 VAV3Q9UKW4 847 aa10.99□□□□□ -0.65
MCF2-209ENST00000520602 PIK3CDO00329 1044 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 FANCGO15287 622 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 CYP26A1O43174 497 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 RDXP35241 583 aaKnown RBP10.98□□□□□ -0.65
MCF2-209ENST00000520602 GGCXP38435 758 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 BACE1P56817 501 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 CALCOCO2Q13137 446 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 BEND6Q5SZJ8 279 aaPredicted RBP10.98□□□□□ -0.65
MCF2-209ENST00000520602 C1orf186Q6ZWK4 172 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 BAP1Q92560 729 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 PBKQ96KB5 322 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 PDCD2LQ9BRP1 358 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 SLC9A2Q9UBY0 812 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
MCF2-209ENST00000520602 INO80B-WBP1J3KQ70 363 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 ZNF263O14978 683 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 SASH3O75995 380 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 CTNNA1P35221 906 aaKnown RBP10.98□□□□□ -0.65
MCF2-209ENST00000520602 PPP2R5CQ13362 524 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 KCTD2Q14681 263 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 HYIQ5T013 277 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 MCPH1Q8NEM0 835 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 SYN2Q92777 582 aaPredicted RBP10.98□□□□□ -0.65
MCF2-209ENST00000520602 MAGOHBQ96A72 148 aaKnown RBP10.98□□□□□ -0.65
MCF2-209ENST00000520602 ELMO3Q96BJ8 720 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 INO80BQ9C086 356 aaPredicted RBP10.98□□□□□ -0.65
MCF2-209ENST00000520602 POLR3FQ9H1D9 316 aaPredicted RBP10.98□□□□□ -0.65
MCF2-209ENST00000520602 ATP6V0A4Q9HBG4 840 aa10.98□□□□□ -0.65
MCF2-209ENST00000520602 DMGDHQ9UI17 866 aaKnown RBP10.98□□□□□ -0.65
MCF2-209ENST00000520602 PTPN22Q9Y2R2 807 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms