RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 SAFBQ15424 915 aaKnown RBP eCLIP18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 CALCRLQ16602 461 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 XKR9Q5GH70 373 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 B3GNT9Q6UX72 402 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 OTUD6AQ7L8S5 288 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 ZNF410Q86VK4 478 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 TPH2Q8IWU9 490 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 DIS3L2Q8IYB7 885 aaKnown RBP18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 NSUN7Q8NE18 718 aaKnown RBP18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 PUF60Q9UHX1 559 aaKnown RBP18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 CD207Q9UJ71 328 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 INPP5FQ9Y2H2 1132 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 TRANK1O15050 2925 aa18.06■□□□□ 0.48
IGHV3-42-201ENST00000520410 VCANP13611 3396 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 PER2O15055 1255 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 SRGAP2CP0DJJ0 459 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 FDPSP14324 419 aaKnown RBP18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 YWHABP31946 246 aaKnown RBP18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 KRT17Q04695 432 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 UBE3AQ05086 875 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 CAMK1Q14012 370 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 CCDC83Q8IWF9 413 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 TMEM143Q96AN5 459 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 CASD1Q96PB1 797 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 CD320Q9NPF0 282 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 RGL1Q9NZL6 768 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 RAPGEFL1Q9UHV5 662 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 BARX2Q9UMQ3 279 aaPredicted RBP18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 COL4A3BPQ9Y5P4 624 aa18.05■□□□□ 0.48
IGHV3-42-201ENST00000520410 BTBD18B2RXH4 712 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 NEMFO60524 1076 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 STBD1O95210 358 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 SEC24BO95487 1268 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 RFC5P40937 340 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 TXKP42681 527 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 FAM189BP81408 668 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 TMEM31Q5JXX7 168 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 KCNT2Q6UVM3 1135 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 EXOC8Q8IYI6 725 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 TMEM87AQ8NBN3 555 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 PSPC1Q8WXF1 523 aaKnown RBP18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 HAS1Q92839 578 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 LPPQ93052 612 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 TCF25Q9BQ70 676 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 MRPL9Q9BYD2 267 aaKnown RBP18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 CWH43Q9H720 699 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 ZSWIM4Q9H7M6 989 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 ATG2AQ2TAZ0 1938 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 WDR81Q562E7 1941 aa18.04■□□□□ 0.48
IGHV3-42-201ENST00000520410 FNDC1Q4ZHG4 1894 aaPredicted RBP18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 PLXNA4Q9HCM2 1894 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 MBTPS2O43462 519 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 ZC3H11AO75152 810 aaKnown RBP eCLIP18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 SRGAP2BP0DMP2 458 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 PPM1AP35813 382 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 LTBRP36941 435 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 RNASELQ05823 741 aaKnown RBP18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 SMAD4Q13485 552 aaKnown RBP18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 EMC2Q15006 297 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 CLLU1OSQ5K130 101 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 LLGL2Q6P1M3 1020 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 TMC7Q7Z402 723 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 ZNF579Q8NAF0 562 aaKnown RBP18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 TCP11Q8WWU5 503 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 MRPS27Q92552 414 aaKnown RBP18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 KHSRPQ92945 711 aaKnown RBP eCLIP18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 MTRQ99707 1265 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 GBP3Q9H0R5 595 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 CHST12Q9NRB3 414 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 WRAP73Q9P2S5 460 aaPredicted RBP18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 PCDHA12Q9UN75 941 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 REV3LO60673 3130 aa18.03■□□□□ 0.48
IGHV3-42-201ENST00000520410 IGKV6-21A0A0C4DH24 114 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 A0A0U1RQF3 1178 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 NT5C1B-RDH14C9J2C7 533 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 ERLIN2O94905 339 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 EOMESO95936 686 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 SKIP12755 728 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 ERVFC1P60507 584 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 ADAM15Q13444 863 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 CTC1Q2NKJ3 1217 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 GLB1LQ6UWU2 654 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 LRRC55Q6ZSA7 311 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 C4orf19Q8IY42 314 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 EFHBQ8N7U6 833 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 FAM184AQ8NB25 1140 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 PRPF31Q8WWY3 499 aaKnown RBP18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 C8orf76Q96K31 380 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 POP1Q99575 1024 aaKnown RBP18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 EIF2AK1Q9BQI3 630 aaKnown RBP18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 TTC12Q9H892 705 aaPredicted RBP18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 RNF19AQ9NV58 838 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 SPG21Q9NZD8 308 aa18.02■□□□□ 0.48
IGHV3-42-201ENST00000520410 SPTBN5Q9NRC6 3674 aaKnown RBP18.02■□□□□ 0.47
IGHV3-42-201ENST00000520410 MCM7P33993 719 aa18.01■□□□□ 0.47
IGHV3-42-201ENST00000520410 PHKA2P46019 1235 aa18.01■□□□□ 0.47
IGHV3-42-201ENST00000520410 ALDH7A1P49419 539 aaKnown RBP18.01■□□□□ 0.47
IGHV3-42-201ENST00000520410 ADHFE1Q8IWW8 467 aa18.01■□□□□ 0.47
IGHV3-42-201ENST00000520410 RNF149Q8NC42 400 aa18.01■□□□□ 0.47
IGHV3-42-201ENST00000520410 PGBD4Q96DM1 585 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms