RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 CSDE1O75534 798 aaKnown RBP28.35■■■□□ 2.13
VEGFA-220ENST00000519767 FGFR4P22455 802 aa28.35■■■□□ 2.13
VEGFA-220ENST00000519767 PPM1AP35813 382 aa28.35■■■□□ 2.13
VEGFA-220ENST00000519767 RFC5P40937 340 aa28.35■■■□□ 2.13
VEGFA-220ENST00000519767 NRIP1P48552 1158 aa28.35■■■□□ 2.13
VEGFA-220ENST00000519767 NR5A1Q13285 461 aa28.35■■■□□ 2.13
VEGFA-220ENST00000519767 TRIM29Q14134 588 aa28.35■■■□□ 2.13
VEGFA-220ENST00000519767 SMAD2Q15796 467 aaKnown RBP28.35■■■□□ 2.13
VEGFA-220ENST00000519767 EARS2Q5JPH6 523 aaKnown RBP28.35■■■□□ 2.13
VEGFA-220ENST00000519767 ZNF598Q86UK7 904 aaKnown RBP28.35■■■□□ 2.13
VEGFA-220ENST00000519767 ADHFE1Q8IWW8 467 aa28.35■■■□□ 2.13
VEGFA-220ENST00000519767 RNF169Q8NCN4 708 aa28.35■■■□□ 2.13
VEGFA-220ENST00000519767 NSUN7Q8NE18 718 aaKnown RBP28.35■■■□□ 2.13
VEGFA-220ENST00000519767 TNFRSF25Q93038 417 aa28.35■■■□□ 2.13
VEGFA-220ENST00000519767 ZSWIM4Q9H7M6 989 aa28.35■■■□□ 2.13
VEGFA-220ENST00000519767 DTNBO60941 627 aa28.34■■■□□ 2.13
VEGFA-220ENST00000519767 ALADP13716 330 aa28.34■■■□□ 2.13
VEGFA-220ENST00000519767 NDUFV1P49821 464 aa28.34■■■□□ 2.13
VEGFA-220ENST00000519767 KRT17Q04695 432 aa28.34■■■□□ 2.13
VEGFA-220ENST00000519767 SMAD4Q13485 552 aaKnown RBP28.34■■■□□ 2.13
VEGFA-220ENST00000519767 TMEM31Q5JXX7 168 aa28.34■■■□□ 2.13
VEGFA-220ENST00000519767 PLA2G4FQ68DD2 849 aa28.34■■■□□ 2.13
VEGFA-220ENST00000519767 KCNT2Q6UVM3 1135 aa28.34■■■□□ 2.13
VEGFA-220ENST00000519767 LRRC55Q6ZSA7 311 aa28.34■■■□□ 2.13
VEGFA-220ENST00000519767 ADGRD2Q7Z7M1 963 aa28.34■■■□□ 2.13
VEGFA-220ENST00000519767 ZNF558Q96NG5 402 aa28.34■■■□□ 2.13
VEGFA-220ENST00000519767 CDCA3Q99618 268 aaPredicted RBP28.34■■■□□ 2.13
VEGFA-220ENST00000519767 LINC01565O15544 149 aa28.33■■■□□ 2.13
VEGFA-220ENST00000519767 MBTPS2O43462 519 aa28.33■■■□□ 2.13
VEGFA-220ENST00000519767 GPR37L1O60883 481 aa28.33■■■□□ 2.13
VEGFA-220ENST00000519767 NPEPPSP55786 919 aa28.33■■■□□ 2.13
VEGFA-220ENST00000519767 RBM23Q86U06 439 aaKnown RBP28.33■■■□□ 2.13
VEGFA-220ENST00000519767 POTEDQ86YR6 584 aa28.33■■■□□ 2.13
VEGFA-220ENST00000519767 MRPS27Q92552 414 aaKnown RBP28.33■■■□□ 2.13
VEGFA-220ENST00000519767 KHSRPQ92945 711 aaKnown RBP eCLIP28.33■■■□□ 2.131e-9■■■□□ 15.1
VEGFA-220ENST00000519767 POP1Q99575 1024 aaKnown RBP28.33■■■□□ 2.13
VEGFA-220ENST00000519767 MRPL9Q9BYD2 267 aaKnown RBP28.33■■■□□ 2.13
VEGFA-220ENST00000519767 DHX33Q9H6R0 707 aaKnown RBP28.33■■■□□ 2.13
VEGFA-220ENST00000519767 PCDHA12Q9UN75 941 aa28.33■■■□□ 2.13
VEGFA-220ENST00000519767 C19orf67A6NJJ6 358 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 ASAP2O43150 1006 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 GAS2O43903 313 aaKnown RBP28.32■■■□□ 2.12
VEGFA-220ENST00000519767 TBX10O75333 385 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 LARGE1O95461 756 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 EYA4O95677 639 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 YWHABP31946 246 aaKnown RBP28.32■■■□□ 2.12
VEGFA-220ENST00000519767 PHKA2P46019 1235 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 POLGP54098 1239 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-220ENST00000519767 ZP2Q05996 745 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 CLUL1Q15846 466 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 CLLU1OSQ5K130 101 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 NCAPH2Q6IBW4 605 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 MSLNLQ96KJ4 702 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 LXNQ9BS40 222 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 SPG21Q9NZD8 308 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 HCSTQ9UBK5 93 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 COL4A3BPQ9Y5P4 624 aa28.32■■■□□ 2.12
VEGFA-220ENST00000519767 FNDC1Q4ZHG4 1894 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-220ENST00000519767 CARNS1A5YM72 827 aa28.31■■■□□ 2.12
VEGFA-220ENST00000519767 BTBD18B2RXH4 712 aa28.31■■■□□ 2.12
VEGFA-220ENST00000519767 ERVFC1P60507 584 aa28.31■■■□□ 2.12
VEGFA-220ENST00000519767 SPIRE1Q08AE8 756 aa28.31■■■□□ 2.12
VEGFA-220ENST00000519767 TWF2Q6IBS0 349 aaKnown RBP28.31■■■□□ 2.12
VEGFA-220ENST00000519767 CATSPER4Q7RTX7 472 aa28.31■■■□□ 2.12
VEGFA-220ENST00000519767 TCP11Q8WWU5 503 aa28.31■■■□□ 2.12
VEGFA-220ENST00000519767 PRPF31Q8WWY3 499 aaKnown RBP28.31■■■□□ 2.12
VEGFA-220ENST00000519767 PSPC1Q8WXF1 523 aaKnown RBP28.31■■■□□ 2.12
VEGFA-220ENST00000519767 NLRP4Q96MN2 994 aa28.31■■■□□ 2.12
VEGFA-220ENST00000519767 LRFN3Q9BTN0 628 aa28.31■■■□□ 2.12
VEGFA-220ENST00000519767 NGRNQ9NPE2 291 aaKnown RBP28.31■■■□□ 2.12
VEGFA-220ENST00000519767 RGL1Q9NZL6 768 aa28.31■■■□□ 2.12
VEGFA-220ENST00000519767 CLEC1BQ9P126 229 aa28.31■■■□□ 2.12
VEGFA-220ENST00000519767 WRAP73Q9P2S5 460 aaPredicted RBP28.31■■■□□ 2.12
VEGFA-220ENST00000519767 FAM205CA6NFA0 338 aa28.3■■■□□ 2.12
VEGFA-220ENST00000519767 FSCN2O14926 492 aa28.3■■■□□ 2.12
VEGFA-220ENST00000519767 ZNF623O75123 536 aa28.3■■■□□ 2.12
VEGFA-220ENST00000519767 RAB27AP51159 221 aa28.3■■■□□ 2.12
VEGFA-220ENST00000519767 COASYQ13057 564 aa28.3■■■□□ 2.12
VEGFA-220ENST00000519767 SRGAP1Q7Z6B7 1085 aa28.3■■■□□ 2.12
VEGFA-220ENST00000519767 KSR1Q8IVT5 923 aa28.3■■■□□ 2.12
VEGFA-220ENST00000519767 DIS3L2Q8IYB7 885 aaKnown RBP28.3■■■□□ 2.12
VEGFA-220ENST00000519767 ZNF579Q8NAF0 562 aaKnown RBP28.3■■■□□ 2.12
VEGFA-220ENST00000519767 HELQQ8TDG4 1101 aa28.3■■■□□ 2.12
VEGFA-220ENST00000519767 DYDC2Q96IM9 177 aa28.3■■■□□ 2.12
VEGFA-220ENST00000519767 IFT122Q9HBG6 1241 aa28.3■■■□□ 2.12
VEGFA-220ENST00000519767 PIN4Q9Y237 131 aaKnown RBP28.3■■■□□ 2.12
VEGFA-220ENST00000519767 SLITRK3O94933 977 aa28.29■■■□□ 2.12
VEGFA-220ENST00000519767 CENPBP07199 599 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-220ENST00000519767 ATF7P17544 494 aaPredicted RBP28.29■■■□□ 2.12
VEGFA-220ENST00000519767 ALDH7A1P49419 539 aaKnown RBP28.29■■■□□ 2.12
VEGFA-220ENST00000519767 CALCRLQ16602 461 aa28.29■■■□□ 2.12
VEGFA-220ENST00000519767 XKR9Q5GH70 373 aa28.29■■■□□ 2.12
VEGFA-220ENST00000519767 TPH2Q8IWU9 490 aa28.29■■■□□ 2.12
VEGFA-220ENST00000519767 LIMCH1Q9UPQ0 1083 aa28.29■■■□□ 2.12
VEGFA-220ENST00000519767 PCDHGC5Q9Y5F6 944 aa28.29■■■□□ 2.12
VEGFA-220ENST00000519767 JAK2O60674 1132 aa28.28■■■□□ 2.12
VEGFA-220ENST00000519767 LYPLA2O95372 231 aa28.28■■■□□ 2.12
VEGFA-220ENST00000519767 SEC24BO95487 1268 aa28.28■■■□□ 2.12
VEGFA-220ENST00000519767 SRGAP2CP0DJJ0 459 aa28.28■■■□□ 2.12
VEGFA-220ENST00000519767 LAMTOR4Q0VGL1 99 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms