RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 CFAP45Q9UL16 551 aa13.6□□□□□ -0.23
CTNNA1-211ENST00000518910 PCDHA7Q9UN72 937 aa13.6□□□□□ -0.23
CTNNA1-211ENST00000518910 TDRD15B5MCY1 1934 aaKnown RBP13.6□□□□□ -0.23
CTNNA1-211ENST00000518910 LAMA3Q16787 3333 aa13.6□□□□□ -0.23
CTNNA1-211ENST00000518910 DENND3A2RUS2 1198 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 CCDC169A6NNP5 214 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 INO80B-WBP1J3KQ70 363 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 CUTAO60888 179 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 ATP2A2P16615 1042 aaKnown RBP13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 GLRA2P23416 452 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 GATMP50440 423 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 SHC4Q6S5L8 630 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 DYMQ7RTS9 669 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 CATSPER4Q7RTX7 472 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 RPAINQ86UA6 219 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 CDR2LQ86X02 465 aaPredicted RBP13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 KCNG4Q8TDN1 519 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 LINC01599Q8WXQ3 324 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 RAD54LQ92698 747 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 CPB2Q96IY4 423 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 ADAM2Q99965 735 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 INO80BQ9C086 356 aaPredicted RBP13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 NT5C3AQ9H0P0 336 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 NKX2-4Q9H2Z4 354 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 TMX1Q9H3N1 280 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 MINDY3Q9H8M7 445 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 ERVK-5Q9HDB9 667 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 BLOC1S4Q9NUP1 217 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 STK24Q9Y6E0 443 aa13.59□□□□□ -0.23
CTNNA1-211ENST00000518910 PPP6R2O75170 966 aa13.58□□□□□ -0.24
CTNNA1-211ENST00000518910 CSPG5O95196 566 aa13.58□□□□□ -0.24
CTNNA1-211ENST00000518910 DARSP14868 501 aaKnown RBP13.58□□□□□ -0.24
CTNNA1-211ENST00000518910 CYP11B2P19099 503 aa13.58□□□□□ -0.24
CTNNA1-211ENST00000518910 EIF4BP23588 611 aaKnown RBP13.58□□□□□ -0.24
CTNNA1-211ENST00000518910 DDIT3P35638 169 aa13.58□□□□□ -0.24
CTNNA1-211ENST00000518910 PEX3P56589 373 aa13.58□□□□□ -0.24
CTNNA1-211ENST00000518910 PAN2Q504Q3 1202 aaKnown RBP13.58□□□□□ -0.24
CTNNA1-211ENST00000518910 RINT1Q6NUQ1 792 aa13.58□□□□□ -0.24
CTNNA1-211ENST00000518910 Q7L0L9 218 aa13.58□□□□□ -0.24
CTNNA1-211ENST00000518910 CERS4Q9HA82 394 aa13.58□□□□□ -0.24
CTNNA1-211ENST00000518910 PIN4Q9Y237 131 aaKnown RBP13.58□□□□□ -0.24
CTNNA1-211ENST00000518910 A0A1B0GVL5 298 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 TULP1O00294 542 aaPredicted RBP13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 B4GALT5O43286 388 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 PARNO95453 639 aaKnown RBP13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 AMHP03971 560 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 XRCC6P12956 609 aaKnown RBP eCLIP13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 PDIA4P13667 645 aaKnown RBP13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 CASP1P29466 404 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 ARL2P36404 184 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 PHKA2P46019 1235 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 SLC12A3P55017 1021 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 TFDP1Q14186 410 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 HYIQ5T013 277 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 RTN4RL1Q86UN2 441 aaPredicted RBP13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 GRAMD1CQ8IYS0 662 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 MCPH1Q8NEM0 835 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 DEPTORQ8TB45 409 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 LARP4BQ92615 738 aaKnown RBP13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 APOL6Q9BWW8 343 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 CCSER1Q9C0I3 900 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 MTUS1Q9ULD2 1270 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 YBX2Q9Y2T7 364 aaKnown RBP13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 ATP6V1DQ9Y5K8 247 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 CITO14578 2027 aa13.57□□□□□ -0.24
CTNNA1-211ENST00000518910 COL4A4P53420 1690 aaPredicted RBP13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 ABHD14A-ACY1A0A1B0GW23 586 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 LCHNA4D1U4 455 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 GPR182O15218 404 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 SLC16A4O15374 487 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 POLR2DO15514 142 aaKnown RBP13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 TLL1O43897 1013 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 ERLIN2O94905 339 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 MUTP22033 750 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 AXDND1Q5T1B0 1012 aaPredicted RBP13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 TWF2Q6IBS0 349 aaKnown RBP13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 C1orf186Q6ZWK4 172 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 SPRED2Q7Z698 418 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 HERC6Q8IVU3 1022 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 EXOC8Q8IYI6 725 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 SYT2Q8N9I0 419 aaPredicted RBP13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 FSIP1Q8NA03 581 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 IFT74Q96LB3 600 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 REEP2Q9BRK0 252 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 PBX4Q9BYU1 374 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 IFT122Q9HBG6 1241 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 FAM13BQ9NYF5 915 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 TBC1D7Q9P0N9 293 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 RCOR1Q9UKL0 485 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 LRFN2Q9ULH4 789 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 ADGRA3Q8IWK6 1321 aa13.56□□□□□ -0.24
CTNNA1-211ENST00000518910 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.55□□□□□ -0.24
CTNNA1-211ENST00000518910 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.55□□□□□ -0.24
CTNNA1-211ENST00000518910 ENPP3O14638 875 aa13.55□□□□□ -0.24
CTNNA1-211ENST00000518910 GAS2O43903 313 aaKnown RBP13.55□□□□□ -0.24
CTNNA1-211ENST00000518910 BAIAP3O94812 1187 aa13.55□□□□□ -0.24
CTNNA1-211ENST00000518910 FAM13AO94988 1023 aa13.55□□□□□ -0.24
CTNNA1-211ENST00000518910 ARHGEF15O94989 841 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms