RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 SV2BQ7L1I2 683 aa13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 C16orf59Q7L2K0 433 aa13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 FMR1NBQ8N0W7 255 aaPredicted RBP13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 KIFAP3Q92845 792 aa13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 DNAJC19Q96DA6 116 aa13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 FDXACB1Q9BRP7 624 aaPredicted RBP13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 NFKBIZQ9BYH8 718 aa13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 PRO3102Q9H379 93 aa13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 AGO3Q9H9G7 860 aaKnown RBP13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 POLD4Q9HCU8 107 aa13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 SERTAD1Q9UHV2 236 aa13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 ODF2LQ9ULJ1 636 aa13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 PDCD11Q14690 1871 aaKnown RBP13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 KIAA1671Q9BY89 1806 aa13.92□□□□□ -0.18
IGHV3-6-201ENST00000518407 ADGRA3Q8IWK6 1321 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 RANBP2P49792 3224 aaKnown RBP13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 PFKMP08237 780 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 SLFN14P0C7P3 912 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 GHRP10912 638 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 DARSP14868 501 aaKnown RBP13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 PTENP60484 403 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 CDC42EP1Q00587 391 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 CACNB1Q02641 598 aaPredicted RBP13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 RAD51AP2Q09MP3 1159 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 SNW1Q13573 536 aaKnown RBP13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 LONRF3Q496Y0 759 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 CDCA2Q69YH5 1023 aaPredicted RBP13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 CNNM4Q6P4Q7 775 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 TSHZ1Q6ZSZ6 1077 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 FAM228AQ86W67 206 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 RNF149Q8NC42 400 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 NLRP7Q8WX94 980 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 DDX12PQ92771 950 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 STAMQ92783 540 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 DRC1Q96MC2 740 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 NLRP4Q96MN2 994 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 LBHD1Q9BQE6 289 aaPredicted RBP13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 MINDY3Q9H8M7 445 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 USP25Q9UHP3 1055 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 NOC2LQ9Y3T9 749 aaKnown RBP13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 CITO14578 2027 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 COL4A6Q14031 1691 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 RALGAPA2Q2PPJ7 1873 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 NLRC5Q86WI3 1866 aa13.91□□□□□ -0.18
IGHV3-6-201ENST00000518407 FRMD3A2A2Y4 597 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 ZNF202O95125 648 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 ACRP10323 421 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 LIG1P18858 919 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 EIF4BP23588 611 aaKnown RBP13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 NAMPTP43490 491 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 UBE2HP62256 183 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 FAM160A1Q05DH4 1040 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 TMEM240Q5SV17 173 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 DYMQ7RTS9 669 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 DEFB128Q7Z7B8 93 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 GRAMD1CQ8IYS0 662 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 USP38Q8NB14 1042 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 GBP4Q96PP9 640 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 FIZ1Q96SL8 496 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 TRIM9Q9C026 710 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 C17orf75Q9HAS0 396 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 ERVK-5Q9HDB9 667 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 LMBRD1Q9NUN5 540 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 GINS2Q9Y248 185 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 ANK1P16157 1881 aa13.9□□□□□ -0.18
IGHV3-6-201ENST00000518407 GOLGA6L4A6NEF3 574 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 SFI1A8K8P3 1242 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 SRGAP2CP0DJJ0 459 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 PLS3P13797 630 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 CD52P31358 61 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 BMP8BP34820 402 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 PHKA2P46019 1235 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 NPTX2P47972 431 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 MBTD1Q05BQ5 628 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 TFDP1Q14186 410 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 PPP2R5AQ15172 486 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 CNKSR3Q6P9H4 555 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 KRBA2Q6ZNG9 492 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 SRGAP1Q7Z6B7 1085 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 CEP57L1Q8IYX8 460 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 RPUSD2Q8IZ73 545 aaKnown RBP13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 DBF4BQ8NFT6 615 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 LINC01599Q8WXQ3 324 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 KCNN1Q92952 543 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 PAGE5Q96GU1 130 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 SCLT1Q96NL6 688 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 C7orf25Q9BPX7 421 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 IFIH1Q9BYX4 1025 aaKnown RBP13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 GCOM2Q9BZD3 368 aaPredicted RBP13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 CCDC113Q9H0I3 377 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 TMX1Q9H3N1 280 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 ARHGAP28Q9P2N2 729 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 PADI3Q9ULW8 664 aa13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 TDRD15B5MCY1 1934 aaKnown RBP13.89□□□□□ -0.19
IGHV3-6-201ENST00000518407 LRRIQ4A6NIV6 560 aa13.88□□□□□ -0.19
IGHV3-6-201ENST00000518407 MGEA5O60502 916 aa13.88□□□□□ -0.19
IGHV3-6-201ENST00000518407 PRPF40AO75400 957 aaKnown RBP13.88□□□□□ -0.19
IGHV3-6-201ENST00000518407 NR1I2O75469 434 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms