RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CCDC89Q8N998 374 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 ANO3Q9BYT9 981 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 RAB20Q9NX57 234 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 TRPC6Q9Y210 931 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 USTQ9Y2C2 406 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 MAP3K7O43318 606 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 HNRNPCL1O60812 293 aaKnown RBP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 ELF3P78545 371 aaPredicted RBP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 FUT2Q10981 343 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 BIRC2Q13490 618 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 USH1GQ495M9 461 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 SH2D4BQ5SQS7 431 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 CYP4F22Q6NT55 531 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 TRMT1LQ7Z2T5 733 aaKnown RBP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 FBXO11Q86XK2 927 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 SRRM1Q8IYB3 904 aaKnown RBP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 SREK1Q8WXA9 508 aaKnown RBP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 NUDCD1Q96RS6 583 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 AMNQ9BXJ7 453 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 GOLPH3Q9H4A6 298 aa7.16□□□□□ -1.26
CPNE3-203ENST00000517490 CNOT7Q9UIV1 285 aaKnown RBP7.16□□□□□ -1.26
CPNE3-203ENST00000517490 TOPAZ1Q8N9V7 1692 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 BTNL10A8MVZ5 291 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 IRX4P78413 519 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 MAPK7Q13164 816 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 DIXDC1Q155Q3 683 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 TBC1D9BQ66K14 1250 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 FAM47EQ6ZV65 393 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 SYDE1Q6ZW31 735 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-203ENST00000517490 SCYL3Q8IZE3 742 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 SLC44A5Q8NCS7 719 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 PGM2Q96G03 612 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 SNF8Q96H20 258 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 INTS2Q9H0H0 1204 aaKnown RBP7.15□□□□□ -1.26
CPNE3-203ENST00000517490 BHMT2Q9H2M3 363 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 FGFR1OP2Q9NVK5 253 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.15□□□□□ -1.26
CPNE3-203ENST00000517490 AGTPBP1Q9UPW5 1226 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 C15orf41Q9Y2V0 281 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 MED1Q15648 1581 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-203ENST00000517490 CA4P22748 312 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 MRPS35P82673 323 aaKnown RBP7.15□□□□□ -1.26
CPNE3-203ENST00000517490 SLC30A9Q6PML9 568 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 CYFIP1Q7L576 1253 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 TRIM59Q8IWR1 403 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 BAP1Q92560 729 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 INPP4AQ96PE3 977 aaPredicted RBP7.15□□□□□ -1.26
CPNE3-203ENST00000517490 FNBP1Q96RU3 617 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 MTRQ99707 1265 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 PAGR1Q9BTK6 254 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 TMEM206Q9H813 350 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 ANGPTL2Q9UKU9 493 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 NFAT5O94916 1531 aa7.15□□□□□ -1.26
CPNE3-203ENST00000517490 TMEM120BA0PK00 339 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 PALM3A6NDB9 673 aaPredicted RBP7.15□□□□□ -1.27
CPNE3-203ENST00000517490 ZBTB5O15062 677 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 FTLP02792 175 aaPredicted RBP7.15□□□□□ -1.27
CPNE3-203ENST00000517490 POLE2P56282 527 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 STAT4Q14765 748 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 BARGINQ6ZT62 677 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 PALM2Q8IXS6 379 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 PDCD7Q8N8D1 485 aaKnown RBP7.15□□□□□ -1.27
CPNE3-203ENST00000517490 CEP120Q8N960 986 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 CEP95Q96GE4 821 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 RBM17Q96I25 401 aaKnown RBP7.15□□□□□ -1.27
CPNE3-203ENST00000517490 CCDC17Q96LX7 622 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 TTC25Q96NG3 672 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 NT5C1BQ96P26 610 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 SERPINB12Q96P63 405 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 NACC1Q96RE7 527 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 DDX23Q9BUQ8 820 aaKnown RBP7.15□□□□□ -1.27
CPNE3-203ENST00000517490 MLXIPLQ9NP71 852 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.15□□□□□ -1.27
CPNE3-203ENST00000517490 GGT7Q9UJ14 662 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 DBR1Q9UK59 544 aaKnown RBP7.15□□□□□ -1.27
CPNE3-203ENST00000517490 ZNF148Q9UQR1 794 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 RBAK-RBAKDNI3L0D1 243 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 ZNF263O14978 683 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 STAMBPO95630 424 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 ITIH2P19823 946 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 MSH2P43246 934 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 NSFP46459 744 aaKnown RBP7.15□□□□□ -1.27
CPNE3-203ENST00000517490 BPIFB4P59827 614 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 PTENP60484 403 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 DYNC1I2Q13409 638 aaKnown RBP7.15□□□□□ -1.27
CPNE3-203ENST00000517490 AOC3Q16853 763 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 LACTB2Q53H82 288 aaPredicted RBP7.15□□□□□ -1.27
CPNE3-203ENST00000517490 FOXR2Q6PJQ5 311 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 ZNF571Q7Z3V5 609 aaPredicted RBP7.15□□□□□ -1.27
CPNE3-203ENST00000517490 SPATA24Q86W54 205 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 CNBD1Q8NA66 436 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 AGPAT1Q99943 283 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 ZC3H12CQ9C0D7 883 aaKnown RBP7.15□□□□□ -1.27
CPNE3-203ENST00000517490 TMOD4Q9NZQ9 345 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 ZFP69BQ9UJL9 534 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 USH1CQ9Y6N9 552 aa7.15□□□□□ -1.27
CPNE3-203ENST00000517490 WNT7AO00755 349 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 TOM1O60784 492 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 ATP2B4P23634 1241 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 ALCAMQ13740 583 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms