RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 TMEM161AQ9NX61 479 aa15.71■□□□□ 0.11
PDGFRB-202ENST00000517488 XIRP2A4UGR9 3374 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 C5orf67F2Z3F1 127 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 DGAT1O75907 488 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 RB1P06400 928 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 SFPQP23246 707 aaKnown RBP eCLIP15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 RPA1P27694 616 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 SKIV2LQ15477 1246 aaKnown RBP15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 IL17AQ16552 155 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 ECM1Q16610 540 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 CATSPER4Q7RTX7 472 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 ECHDC2Q86YB7 292 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 ERMNQ8TAM6 284 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 ASAP3Q8TDY4 903 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 TCP11Q8WWU5 503 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 CCDC43Q96MW1 224 aaKnown RBP15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 INO80BQ9C086 356 aaPredicted RBP15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 ELAC1Q9H777 363 aaKnown RBP15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 HCSTQ9UBK5 93 aa15.7■□□□□ 0.1
PDGFRB-202ENST00000517488 CUL9Q8IWT3 2517 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 A0A0U1RQF3 1178 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 GRM6O15303 877 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 ASAP2O43150 1006 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 USO1O60763 962 aaKnown RBP15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 ARL2P36404 184 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 RILPL1Q5EBL4 403 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 ZNF598Q86UK7 904 aaKnown RBP15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 IGSF22Q8N9C0 903 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 RNF149Q8NC42 400 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 RNF169Q8NCN4 708 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 MRPL38Q96DV4 380 aaKnown RBP15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 NACC1Q96RE7 527 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 CHST12Q9NRB3 414 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 LRWD1Q9UFC0 647 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 PIN4Q9Y237 131 aaKnown RBP15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 RWDD3Q9Y3V2 267 aa15.69■□□□□ 0.1
PDGFRB-202ENST00000517488 LOXHD1Q8IVV2 1947 aa15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 PP2D1A8MPX8 630 aa15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 ATF7P17544 494 aaPredicted RBP15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 CCT6AP40227 531 aaKnown RBP15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 PDIA5Q14554 519 aa15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 MXD4Q14582 209 aaPredicted RBP15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 PTPROQ16827 1216 aa15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 HAUS3Q68CZ6 603 aa15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 MAEAQ7L5Y9 396 aa15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 SRGAP1Q7Z6B7 1085 aa15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 CASD1Q96PB1 797 aa15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 C11orf84Q9BUA3 381 aaPredicted RBP15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 PLVAPQ9BX97 442 aa15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 GPRC5CQ9NQ84 441 aa15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 TYW1Q9NV66 732 aaKnown RBP15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 DACT1Q9NYF0 836 aa15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 THEGQ9P2T0 379 aa15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 DBR1Q9UK59 544 aaKnown RBP15.68■□□□□ 0.1
PDGFRB-202ENST00000517488 LAD1O00515 517 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 GLRA2P23416 452 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 CDC25AP30304 524 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 HOXA11P31270 313 aaPredicted RBP15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 PRPHP41219 470 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 PHKA2P46019 1235 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 PTENP60484 403 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 ATP2C1P98194 919 aaPredicted RBP15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 TFF2Q03403 129 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 CAPSQ13938 189 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 CLLU1OSQ5K130 101 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 TWF2Q6IBS0 349 aaKnown RBP15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 DTHD1Q6ZMT9 781 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 LRRC55Q6ZSA7 311 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 KLHL23Q8NBE8 558 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 ATXN2LQ8WWM7 1075 aaKnown RBP15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 TMEM117Q9H0C3 514 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 POLR3FQ9H1D9 316 aaPredicted RBP15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 ALG13Q9NP73 1137 aaKnown RBP15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 AGPAT5Q9NUQ2 364 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 PLAGL2Q9UPG8 496 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 KIAA1024Q9UPX6 916 aa15.67■□□□□ 0.1
PDGFRB-202ENST00000517488 CSPG5O95196 566 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 EOMESO95936 686 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 ITGB1P05556 798 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 CAMK1Q14012 370 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 TFDP1Q14186 410 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 LONRF3Q496Y0 759 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 SPOUT1Q5T280 376 aaKnown RBP15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 PADI6Q6TGC4 694 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 SNX29Q8TEQ0 813 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 LPPQ93052 612 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 MMTAG2Q9BU76 263 aaKnown RBP15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 TRAIPQ9BWF2 469 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 COL25A1Q9BXS0 654 aaPredicted RBP15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 RAB34Q9BZG1 259 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 CWH43Q9H720 699 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 MYO7AQ13402 2215 aa15.66■□□□□ 0.1
PDGFRB-202ENST00000517488 COL4A4P53420 1690 aaPredicted RBP15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 VPS37CA5D8V6 355 aaPredicted RBP15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 ARHGEF35A5YM69 484 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 MEIS3P2A8K0S8 358 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 INO80B-WBP1J3KQ70 363 aa15.65■□□□□ 0.1
PDGFRB-202ENST00000517488 DLL1O00548 723 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms