RNA–Protein interactions for RNA: ENST00000517315.1

NSMCE2-202, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3 BASIC

Gene NSMCE2, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-202ENST00000517315 ZNF408Q9H9D4 720 aa6.77□□□□□ -1.33
NSMCE2-202ENST00000517315 KANSL2Q9H9L4 492 aa6.77□□□□□ -1.33
NSMCE2-202ENST00000517315 LY9Q9HBG7 655 aa6.77□□□□□ -1.33
NSMCE2-202ENST00000517315 ATP13A1Q9HD20 1204 aa6.77□□□□□ -1.33
NSMCE2-202ENST00000517315 IL17RBQ9NRM6 502 aa6.77□□□□□ -1.33
NSMCE2-202ENST00000517315 CLIP2Q9UDT6 1046 aa6.77□□□□□ -1.33
NSMCE2-202ENST00000517315 KLHL3Q9UH77 587 aa6.77□□□□□ -1.33
NSMCE2-202ENST00000517315 CEP131Q9UPN4 1083 aa6.77□□□□□ -1.33
NSMCE2-202ENST00000517315 SLC12A7Q9Y666 1083 aa6.77□□□□□ -1.33
NSMCE2-202ENST00000517315 MYH6P13533 1939 aa6.77□□□□□ -1.33
NSMCE2-202ENST00000517315 GOLGA8BA8MQT2 603 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 CHURC1-FNTBB4DL54 471 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 ZBTB43O43298 467 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 GREM1O60565 184 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 CTNND1O60716 968 aaKnown RBP6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 USP2O75604 605 aaPredicted RBP6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 TTLL1O95922 423 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 ASNSP08243 561 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 TOP1P11387 765 aaKnown RBP6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 RRP1BQ14684 758 aaKnown RBP6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 SEPT2Q15019 361 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 SEC23AQ15436 765 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 ARMC9Q7Z3E5 817 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 RAB11FIP4Q86YS3 637 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 SLFN12Q8IYM2 578 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 ENAHQ8N8S7 591 aaPredicted RBP6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 NUP133Q8WUM0 1156 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 ANKS1AQ92625 1134 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 ZNF274Q96GC6 653 aaPredicted RBP6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 TMX3Q96JJ7 454 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 WRNIP1Q96S55 665 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 TMEM47Q9BQJ4 181 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 LRRC3Q9BY71 257 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 AGXT2Q9BYV1 514 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 GINM1Q9NU53 330 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 MTMR4Q9NYA4 1195 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 ADAMTS1Q9UHI8 967 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 TPCN1Q9ULQ1 816 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 FZD1Q9UP38 647 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 DOCK1Q14185 1865 aa6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 GREB1LQ9C091 1923 aaPredicted RBP6.76□□□□□ -1.33
NSMCE2-202ENST00000517315 IGKV6D-41A0A0C4DH26 115 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 GOLGA8AA7E2F4 631 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 TRAF5O00463 557 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 CPLX1O14810 134 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 DHX16O60231 1041 aaKnown RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 DNAJA2O60884 412 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 CALM1P0DP23 149 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 CALM2P0DP24 149 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 CALM3P0DP25 149 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 EEF2P13639 858 aaKnown RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 YY1P25490 414 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 PDIA3P30101 505 aaKnown RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 METAP2P50579 478 aaKnown RBP eCLIP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 CCT2P78371 535 aaKnown RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 ICA1Q05084 483 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 ME3Q16798 604 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 SHROOM1Q2M3G4 852 aaPredicted RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 RCSD1Q6JBY9 416 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 CPLX2Q6PUV4 134 aaKnown RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 APOA5Q6Q788 366 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 SGMS1Q86VZ5 419 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 MICU3Q86XE3 530 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 CCDC83Q8IWF9 413 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 CCDC144CPQ8IYA2 1237 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 ZNF654Q8IZM8 581 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 LRRC47Q8N1G4 583 aaKnown RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 NECAB1Q8N987 351 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 CTCFLQ8NI51 663 aaPredicted RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 ZNF296Q8WUU4 475 aaPredicted RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 ZKSCAN4Q969J2 545 aaPredicted RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 ASIC4Q96FT7 647 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 Q96M66 194 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 IPO9Q96P70 1041 aaKnown RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 CARS2Q9HA77 564 aaKnown RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 AS3MTQ9HBK9 375 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 NYAP2Q9P242 653 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 ZNF112Q9UJU3 913 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 ZBTB21Q9ULJ3 1066 aa6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 ISY1Q9ULR0 285 aaKnown RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 BAZ2BQ9UIF8 2168 aaKnown RBP6.75□□□□□ -1.33
NSMCE2-202ENST00000517315 PLIN4Q96Q06 1357 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 CCDC196A0A1B0GTZ2 297 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 UBE2Q2LH0YL09 131 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 BIN1O00499 593 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 PFKFB2O60825 505 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 DDAH1O94760 285 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 CELF2O95319 508 aaKnown RBP6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 RXRAP19793 462 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 KIF5BP33176 963 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 GUCY1A2P33402 732 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 EVCP57679 992 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 JAG1P78504 1218 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 PPP2R5BQ15173 497 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 MOB2Q70IA6 237 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 THAP5Q7Z6K1 395 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 ATG4DQ86TL0 474 aaPredicted RBP6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 ANKRD13AQ8IZ07 590 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 SCYL3Q8IZE3 742 aa6.74□□□□□ -1.33
NSMCE2-202ENST00000517315 C2orf69Q8N8R5 385 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms