RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 SPRED2Q7Z698 418 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 ZNF710Q8N1W2 664 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 MICALL1Q8N3F8 863 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 PPM1EQ8WY54 764 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 GAS2L1Q99501 681 aaPredicted RBP12.81□□□□□ -0.36
SUB1-213ENST00000515355 INO80BQ9C086 356 aaPredicted RBP12.81□□□□□ -0.36
SUB1-213ENST00000515355 POLR3FQ9H1D9 316 aaPredicted RBP12.81□□□□□ -0.36
SUB1-213ENST00000515355 BHMT2Q9H2M3 363 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 ZSCAN16Q9H4T2 348 aaPredicted RBP12.81□□□□□ -0.36
SUB1-213ENST00000515355 GPRC5CQ9NQ84 441 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 XPNPEP1Q9NQW7 623 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 TFIP11Q9UBB9 837 aaKnown RBP12.81□□□□□ -0.36
SUB1-213ENST00000515355 DNM3Q9UQ16 869 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 TMEM265A0A087WTH1 108 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 LRRIQ4A6NIV6 560 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 ASAP2O43150 1006 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 GAS2O43903 313 aaKnown RBP12.8□□□□□ -0.36
SUB1-213ENST00000515355 BMP15O95972 392 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 STAG3L1P0CL83 205 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 FOSL2P15408 326 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 LIG1P18858 919 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 SFPQP23246 707 aaKnown RBP eCLIP12.8□□□□□ -0.36
SUB1-213ENST00000515355 UBA7P41226 1012 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 TFDP1Q14186 410 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 BTG3Q14201 252 aaPredicted RBP12.8□□□□□ -0.36
SUB1-213ENST00000515355 BECN1Q14457 450 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 DHX8Q14562 1220 aaKnown RBP12.8□□□□□ -0.36
SUB1-213ENST00000515355 LONRF3Q496Y0 759 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 SPECC1Q5M775 1068 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 ARL6IP4Q66PJ3 421 aaKnown RBP12.8□□□□□ -0.36
SUB1-213ENST00000515355 CABP7Q86V35 215 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 ZNF410Q86VK4 478 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 ASAP3Q8TDY4 903 aa12.8□□□□□ -0.36
SUB1-213ENST00000515355 TSPYL2Q9H2G4 693 aaPredicted RBP12.8□□□□□ -0.36
SUB1-213ENST00000515355 DBR1Q9UK59 544 aaKnown RBP12.8□□□□□ -0.36
SUB1-213ENST00000515355 PIN4Q9Y237 131 aaKnown RBP12.8□□□□□ -0.36
SUB1-213ENST00000515355 INO80B-WBP1J3KQ70 363 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 SLC34A2O95436 690 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 PHKA2P46019 1235 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 SARSP49591 514 aaKnown RBP12.79□□□□□ -0.36
SUB1-213ENST00000515355 GATMP50440 423 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 GRIN1Q05586 938 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 RAD51AP2Q09MP3 1159 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 MXD4Q14582 209 aaPredicted RBP12.79□□□□□ -0.36
SUB1-213ENST00000515355 STK38Q15208 465 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 TMEM132AQ24JP5 1023 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 SPOUT1Q5T280 376 aaKnown RBP12.79□□□□□ -0.36
SUB1-213ENST00000515355 TWF2Q6IBS0 349 aaKnown RBP12.79□□□□□ -0.36
SUB1-213ENST00000515355 SLC24A5Q71RS6 500 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 FIBCD1Q8N539 461 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 MCPH1Q8NEM0 835 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 CALML4Q96GE6 196 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 USP28Q96RU2 1077 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 MMTAG2Q9BU76 263 aaKnown RBP12.79□□□□□ -0.36
SUB1-213ENST00000515355 RGS18Q9NS28 235 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 C1orf112Q9NSG2 853 aa12.79□□□□□ -0.36
SUB1-213ENST00000515355 LINC01553A4QN01 128 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 TBKBP1A7MCY6 615 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 ERLIN2O94905 339 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 CSPG5O95196 566 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 ZSCAN22P10073 491 aaPredicted RBP12.78□□□□□ -0.36
SUB1-213ENST00000515355 MUTP22033 750 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 GLRA2P23416 452 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 ARL2P36404 184 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 NCBP1Q09161 790 aaKnown RBP12.78□□□□□ -0.36
SUB1-213ENST00000515355 PKP1Q13835 747 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 CCDC85BQ15834 202 aaPredicted RBP12.78□□□□□ -0.36
SUB1-213ENST00000515355 NPAS4Q8IUM7 802 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 ZNF396Q96N95 335 aaPredicted RBP12.78□□□□□ -0.36
SUB1-213ENST00000515355 CLIC6Q96NY7 704 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 TGS1Q96RS0 853 aaKnown RBP12.78□□□□□ -0.36
SUB1-213ENST00000515355 C17orf80Q9BSJ5 609 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 CSRNP2Q9H175 543 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 MINDY3Q9H8M7 445 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 IFT122Q9HBG6 1241 aa12.78□□□□□ -0.36
SUB1-213ENST00000515355 EPOPA6NHQ4 379 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 EYA4O95677 639 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 FGFR1P11362 822 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 CYP11B2P19099 503 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 HTRA4P83105 476 aaPredicted RBP12.77□□□□□ -0.37
SUB1-213ENST00000515355 GRB10Q13322 594 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 CAPSQ13938 189 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 KARSQ15046 597 aaKnown RBP12.77□□□□□ -0.37
SUB1-213ENST00000515355 TPRNQ4KMQ1 711 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 KCNK18Q7Z418 384 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 SRGAP1Q7Z6B7 1085 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 ZBTB8OSQ8IWT0 167 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 ABI1Q8IZP0 508 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 DEPTORQ8TB45 409 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 GDPD5Q8WTR4 605 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 CPB2Q96IY4 423 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 IFT74Q96LB3 600 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 AK8Q96MA6 479 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 PNMA5Q96PV4 448 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 PANK2Q9BZ23 570 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 NT5C3AQ9H0P0 336 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 DACT1Q9NYF0 836 aa12.77□□□□□ -0.37
SUB1-213ENST00000515355 WDR81Q562E7 1941 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 CCDC169A6NNP5 214 aa12.76□□□□□ -0.37
SUB1-213ENST00000515355 SFI1A8K8P3 1242 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms