RNA–Protein interactions for RNA: ENST00000515339.5

PACRGL-233, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-233ENST00000515339 ZNF410Q86VK4 478 aa24.7■■□□□ 1.54
PACRGL-233ENST00000515339 SLC7A3Q8WY07 619 aa24.7■■□□□ 1.54
PACRGL-233ENST00000515339 TMEM143Q96AN5 459 aa24.7■■□□□ 1.54
PACRGL-233ENST00000515339 AAASQ9NRG9 546 aa24.7■■□□□ 1.54
PACRGL-233ENST00000515339 PCDHGC5Q9Y5F6 944 aa24.7■■□□□ 1.54
PACRGL-233ENST00000515339 LINC01565O15544 149 aa24.69■■□□□ 1.54
PACRGL-233ENST00000515339 HOXA2O43364 376 aa24.69■■□□□ 1.54
PACRGL-233ENST00000515339 NEMFO60524 1076 aa24.69■■□□□ 1.54
PACRGL-233ENST00000515339 SFPQP23246 707 aaKnown RBP eCLIP24.69■■□□□ 1.54
PACRGL-233ENST00000515339 DLX2Q07687 328 aaPredicted RBP24.69■■□□□ 1.54
PACRGL-233ENST00000515339 CTC1Q2NKJ3 1217 aa24.69■■□□□ 1.54
PACRGL-233ENST00000515339 CLLU1OSQ5K130 101 aa24.69■■□□□ 1.54
PACRGL-233ENST00000515339 LRRC55Q6ZSA7 311 aa24.69■■□□□ 1.54
PACRGL-233ENST00000515339 TPH2Q8IWU9 490 aa24.69■■□□□ 1.54
PACRGL-233ENST00000515339 THNSL1Q8IYQ7 743 aa24.69■■□□□ 1.54
PACRGL-233ENST00000515339 DHX33Q9H6R0 707 aaKnown RBP24.69■■□□□ 1.54
PACRGL-233ENST00000515339 ZSWIM4Q9H7M6 989 aa24.69■■□□□ 1.54
PACRGL-233ENST00000515339 DACT1Q9NYF0 836 aa24.69■■□□□ 1.54
PACRGL-233ENST00000515339 PCDHA12Q9UN75 941 aa24.69■■□□□ 1.54
PACRGL-233ENST00000515339 COL4A3BPQ9Y5P4 624 aa24.69■■□□□ 1.54
PACRGL-233ENST00000515339 A0A0U1RQF3 1178 aa24.68■■□□□ 1.54
PACRGL-233ENST00000515339 GRXCR2A6NFK2 248 aa24.68■■□□□ 1.54
PACRGL-233ENST00000515339 NCK2O43639 380 aa24.68■■□□□ 1.54
PACRGL-233ENST00000515339 FGF18O76093 207 aa24.68■■□□□ 1.54
PACRGL-233ENST00000515339 SLITRK3O94933 977 aa24.68■■□□□ 1.54
PACRGL-233ENST00000515339 ATF7P17544 494 aaPredicted RBP24.68■■□□□ 1.54
PACRGL-233ENST00000515339 CLUL1Q15846 466 aa24.68■■□□□ 1.54
PACRGL-233ENST00000515339 XKR9Q5GH70 373 aa24.68■■□□□ 1.54
PACRGL-233ENST00000515339 ZNF598Q86UK7 904 aaKnown RBP24.68■■□□□ 1.54
PACRGL-233ENST00000515339 ABI1Q8IZP0 508 aa24.68■■□□□ 1.54
PACRGL-233ENST00000515339 PRPF31Q8WWY3 499 aaKnown RBP24.68■■□□□ 1.54
PACRGL-233ENST00000515339 EIF2AK1Q9BQI3 630 aaKnown RBP24.68■■□□□ 1.54
PACRGL-233ENST00000515339 TTC12Q9H892 705 aaPredicted RBP24.68■■□□□ 1.54
PACRGL-233ENST00000515339 CD320Q9NPF0 282 aa24.68■■□□□ 1.54
PACRGL-233ENST00000515339 PIN4Q9Y237 131 aaKnown RBP24.68■■□□□ 1.54
PACRGL-233ENST00000515339 TBX10O75333 385 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 LAG3P18627 525 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 ATP2B1P20020 1258 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 RFC5P40937 340 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 TXKP42681 527 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 EMC2Q15006 297 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 OTUD6AQ7L8S5 288 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 CATSPER4Q7RTX7 472 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 FAM178BQ8IXR5 827 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 LRRC43Q8N309 656 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 HELQQ8TDG4 1101 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 INO80BQ9C086 356 aaPredicted RBP24.67■■□□□ 1.54
PACRGL-233ENST00000515339 IFT122Q9HBG6 1241 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 CHST12Q9NRB3 414 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 PPME1Q9Y570 386 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 C5orf42Q9H799 3197 aa24.67■■□□□ 1.54
PACRGL-233ENST00000515339 PBX3P40426 434 aa24.66■■□□□ 1.54
PACRGL-233ENST00000515339 SAFBQ15424 915 aaKnown RBP eCLIP24.66■■□□□ 1.54
PACRGL-233ENST00000515339 PUS10Q3MIT2 529 aaKnown RBP24.66■■□□□ 1.54
PACRGL-233ENST00000515339 TWF2Q6IBS0 349 aaKnown RBP24.66■■□□□ 1.54
PACRGL-233ENST00000515339 RBM23Q86U06 439 aaKnown RBP24.66■■□□□ 1.54
PACRGL-233ENST00000515339 PSPC1Q8WXF1 523 aaKnown RBP24.66■■□□□ 1.54
PACRGL-233ENST00000515339 PPP2R3CQ969Q6 453 aa24.66■■□□□ 1.54
PACRGL-233ENST00000515339 C8orf76Q96K31 380 aa24.66■■□□□ 1.54
PACRGL-233ENST00000515339 MTMR9Q96QG7 549 aa24.66■■□□□ 1.54
PACRGL-233ENST00000515339 LLPHQ9BRT6 129 aaKnown RBP24.66■■□□□ 1.54
PACRGL-233ENST00000515339 TMEM60Q9H2L4 133 aa24.66■■□□□ 1.54
PACRGL-233ENST00000515339 EOMESO95936 686 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 SRGAP2CP0DJJ0 459 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 MCM7P33993 719 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 PHKA2P46019 1235 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 NRIP1P48552 1158 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 UBE3AQ05086 875 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 LAMTOR4Q0VGL1 99 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 LONRF3Q496Y0 759 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 EXOC8Q8IYI6 725 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 MICAL1Q8TDZ2 1067 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 KHSRPQ92945 711 aaKnown RBP eCLIP24.65■■□□□ 1.542e-6■■■■□ 20.1
PACRGL-233ENST00000515339 ZSCAN31Q96LW9 406 aaPredicted RBP24.65■■□□□ 1.54
PACRGL-233ENST00000515339 HSD17B14Q9BPX1 270 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 MINDY3Q9H8M7 445 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 TLR9Q9NR96 1032 aa24.65■■□□□ 1.54
PACRGL-233ENST00000515339 POTEMA6NI47 508 aa24.64■■□□□ 1.54
PACRGL-233ENST00000515339 ADAM15Q13444 863 aa24.64■■□□□ 1.54
PACRGL-233ENST00000515339 CSPP1Q1MSJ5 1256 aa24.64■■□□□ 1.54
PACRGL-233ENST00000515339 KCNT2Q6UVM3 1135 aa24.64■■□□□ 1.54
PACRGL-233ENST00000515339 LPPQ93052 612 aa24.64■■□□□ 1.54
PACRGL-233ENST00000515339 ZNF558Q96NG5 402 aa24.64■■□□□ 1.54
PACRGL-233ENST00000515339 ERVFC1P60507 584 aa24.63■■□□□ 1.53
PACRGL-233ENST00000515339 TCP11Q8WWU5 503 aa24.63■■□□□ 1.53
PACRGL-233ENST00000515339 MTRQ99707 1265 aa24.63■■□□□ 1.53
PACRGL-233ENST00000515339 TRAIPQ9BWF2 469 aa24.63■■□□□ 1.53
PACRGL-233ENST00000515339 XPNPEP1Q9NQW7 623 aa24.63■■□□□ 1.53
PACRGL-233ENST00000515339 SH2B1Q9NRF2 756 aaPredicted RBP24.63■■□□□ 1.53
PACRGL-233ENST00000515339 A0A087WWV3 80 aa24.62■■□□□ 1.53
PACRGL-233ENST00000515339 GAS2O43903 313 aaKnown RBP24.62■■□□□ 1.53
PACRGL-233ENST00000515339 LYPLA2O95372 231 aa24.62■■□□□ 1.53
PACRGL-233ENST00000515339 SSTR3P32745 418 aaPredicted RBP24.62■■□□□ 1.53
PACRGL-233ENST00000515339 NDUFV1P49821 464 aa24.62■■□□□ 1.53
PACRGL-233ENST00000515339 FERMT3Q86UX7 667 aa24.62■■□□□ 1.53
PACRGL-233ENST00000515339 EFHBQ8N7U6 833 aa24.62■■□□□ 1.53
PACRGL-233ENST00000515339 RNF149Q8NC42 400 aa24.62■■□□□ 1.53
PACRGL-233ENST00000515339 EPHX3Q9H6B9 360 aa24.62■■□□□ 1.53
PACRGL-233ENST00000515339 TLE6Q9H808 572 aa24.62■■□□□ 1.53
PACRGL-233ENST00000515339 AGPAT5Q9NUQ2 364 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms