RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 MAEAQ7L5Y9 396 aa14.57□□□□□ -0.08
CDK7-212ENST00000515180 CATSPER4Q7RTX7 472 aa14.57□□□□□ -0.08
CDK7-212ENST00000515180 CATSPER3Q86XQ3 398 aa14.57□□□□□ -0.08
CDK7-212ENST00000515180 KLHL23Q8NBE8 558 aa14.57□□□□□ -0.08
CDK7-212ENST00000515180 NEK9Q8TD19 979 aa14.57□□□□□ -0.08
CDK7-212ENST00000515180 PSPC1Q8WXF1 523 aaKnown RBP14.57□□□□□ -0.08
CDK7-212ENST00000515180 HLA-CQ95604 372 aa14.57□□□□□ -0.08
CDK7-212ENST00000515180 MTRQ99707 1265 aa14.57□□□□□ -0.08
CDK7-212ENST00000515180 C11orf84Q9BUA3 381 aaPredicted RBP14.57□□□□□ -0.08
CDK7-212ENST00000515180 BACH2Q9BYV9 841 aa14.57□□□□□ -0.08
CDK7-212ENST00000515180 ELAC1Q9H777 363 aaKnown RBP14.57□□□□□ -0.08
CDK7-212ENST00000515180 ANKEF1Q9NU02 776 aa14.57□□□□□ -0.08
CDK7-212ENST00000515180 TYW1Q9NV66 732 aaKnown RBP14.57□□□□□ -0.08
CDK7-212ENST00000515180 PLAGL2Q9UPG8 496 aa14.57□□□□□ -0.08
CDK7-212ENST00000515180 RWDD3Q9Y3V2 267 aa14.57□□□□□ -0.08
CDK7-212ENST00000515180 PPME1Q9Y570 386 aa14.57□□□□□ -0.08
CDK7-212ENST00000515180 MYO7AQ13402 2215 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 USO1O60763 962 aaKnown RBP14.56□□□□□ -0.08
CDK7-212ENST00000515180 ITGB1P05556 798 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 ATF7P17544 494 aaPredicted RBP14.56□□□□□ -0.08
CDK7-212ENST00000515180 SFPQP23246 707 aaKnown RBP eCLIP14.56□□□□□ -0.08
CDK7-212ENST00000515180 TRAPPC10P48553 1259 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 MCM2P49736 904 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 RARRES1P49788 294 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 PTGDRQ13258 359 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 CAMK1Q14012 370 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 TCEAL5Q5H9L2 206 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 CLLU1OSQ5K130 101 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 POTEGQ6S5H5 508 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 LRRC55Q6ZSA7 311 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 FERMT3Q86UX7 667 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 EXOC8Q8IYI6 725 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 RNF149Q8NC42 400 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 SPPL3Q8TCT6 385 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 ASAP3Q8TDY4 903 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 TCP11Q8WWU5 503 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 LPPQ93052 612 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 CASD1Q96PB1 797 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 SMC3Q9UQE7 1217 aa14.56□□□□□ -0.08
CDK7-212ENST00000515180 PIN4Q9Y237 131 aaKnown RBP14.56□□□□□ -0.08
CDK7-212ENST00000515180 A0A0U1RQF3 1178 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 MEIS3P2A8K0S8 358 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 ORC2Q13416 577 aaPredicted RBP14.55□□□□□ -0.08
CDK7-212ENST00000515180 ECM1Q16610 540 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 TWF2Q6IBS0 349 aaKnown RBP14.55□□□□□ -0.08
CDK7-212ENST00000515180 FAM43BQ6ZT52 329 aaPredicted RBP14.55□□□□□ -0.08
CDK7-212ENST00000515180 ZNF598Q86UK7 904 aaKnown RBP14.55□□□□□ -0.08
CDK7-212ENST00000515180 HELQQ8TDG4 1101 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 CCDC43Q96MW1 224 aaKnown RBP14.55□□□□□ -0.08
CDK7-212ENST00000515180 NECAB3Q96P71 396 aaPredicted RBP14.55□□□□□ -0.08
CDK7-212ENST00000515180 PLVAPQ9BX97 442 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 INO80BQ9C086 356 aaPredicted RBP14.55□□□□□ -0.08
CDK7-212ENST00000515180 TMEM117Q9H0C3 514 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 CWH43Q9H720 699 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 TUFT1Q9NNX1 390 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 GPRC5CQ9NQ84 441 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 CHST12Q9NRB3 414 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 COG5Q9UP83 839 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 KIF3AQ9Y496 699 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 PCDHGC5Q9Y5F6 944 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 PRUNE2Q8WUY3 3088 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 PLXNA4Q9HCM2 1894 aa14.55□□□□□ -0.08
CDK7-212ENST00000515180 H3BQV1 296 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 DGAT1O75907 488 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 BMP1P13497 986 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 GTF2F1P35269 517 aaKnown RBP eCLIP14.54□□□□□ -0.08
CDK7-212ENST00000515180 IRS1P35568 1242 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 ARL2P36404 184 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 PBX3P40426 434 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 PHKA2P46019 1235 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 IL17AQ16552 155 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 TIGD5Q53EQ6 642 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 EP400NLQ6ZTU2 488 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 SRGAP1Q7Z6B7 1085 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 COLGALT1Q8NBJ5 622 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 ADAMTS19Q8TE59 1207 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 POF1BQ8WVV4 589 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 SYMPKQ92797 1274 aaKnown RBP14.54□□□□□ -0.08
CDK7-212ENST00000515180 P2RX5Q93086 422 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 POLR3CQ9BUI4 534 aaPredicted RBP14.54□□□□□ -0.08
CDK7-212ENST00000515180 LMAN2LQ9H0V9 348 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 POLR3FQ9H1D9 316 aaPredicted RBP14.54□□□□□ -0.08
CDK7-212ENST00000515180 NSUN3Q9H649 340 aaKnown RBP14.54□□□□□ -0.08
CDK7-212ENST00000515180 UBE2ZQ9H832 354 aaPredicted RBP14.54□□□□□ -0.08
CDK7-212ENST00000515180 POLD4Q9HCU8 107 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.54□□□□□ -0.08
CDK7-212ENST00000515180 AGPAT5Q9NUQ2 364 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 FAM105AQ9NUU6 356 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
CDK7-212ENST00000515180 DACT1Q9NYF0 836 aa14.54□□□□□ -0.08
CDK7-212ENST00000515180 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.53□□□□□ -0.08
CDK7-212ENST00000515180 PP2D1A8MPX8 630 aa14.53□□□□□ -0.08
CDK7-212ENST00000515180 ASAP2O43150 1006 aa14.53□□□□□ -0.08
CDK7-212ENST00000515180 GAS2O43903 313 aaKnown RBP14.53□□□□□ -0.08
CDK7-212ENST00000515180 XRCC6P12956 609 aaKnown RBP eCLIP14.53□□□□□ -0.08
CDK7-212ENST00000515180 KCNA5P22460 613 aa14.53□□□□□ -0.08
CDK7-212ENST00000515180 GLRA2P23416 452 aa14.53□□□□□ -0.08
CDK7-212ENST00000515180 RPA1P27694 616 aa14.53□□□□□ -0.08
CDK7-212ENST00000515180 CDC25AP30304 524 aa14.53□□□□□ -0.08
CDK7-212ENST00000515180 CCT6AP40227 531 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms