RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 MMP10P09238 476 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 PRCPP42785 496 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 MTF1Q14872 753 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 FAM83BQ5T0W9 1011 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 KRT39Q6A163 491 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 LONP2Q86WA8 852 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 PPM1NQ8N819 430 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 LRRC1Q9BTT6 524 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 GTPBP10A4D1E9 387 aaKnown RBP14.17□□□□□ -0.14
TCOF1-214ENST00000515035 TCP11X1B4DZS4 312 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 DAB1O75553 588 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 MED21Q13503 144 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 CYTH1Q15438 398 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 TTLL6Q8N841 843 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 C7orf31Q8N865 590 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 ZBTB18Q99592 522 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 IRX2Q9BZI1 471 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-214ENST00000515035 ADAM22Q9P0K1 906 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-214ENST00000515035 NOC2LQ9Y3T9 749 aaKnown RBP14.17□□□□□ -0.14
TCOF1-214ENST00000515035 ADRA2BP18089 450 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 PSMA2P25787 234 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 HSPA9P38646 679 aaKnown RBP14.17□□□□□ -0.14
TCOF1-214ENST00000515035 HABP4Q5JVS0 413 aaKnown RBP14.17□□□□□ -0.14
TCOF1-214ENST00000515035 DHX38Q92620 1227 aaKnown RBP14.17□□□□□ -0.14
TCOF1-214ENST00000515035 SEC31BQ9NQW1 1179 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 GTSE1Q9NYZ3 720 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 ZDHHC9Q9Y397 364 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 INO80B-WBP1J3KQ70 363 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 LPXNO60711 386 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 ERFP50548 548 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 COPS2P61201 443 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 CCNA1P78396 465 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 BYSLQ13895 437 aaKnown RBP14.17□□□□□ -0.14
TCOF1-214ENST00000515035 TFDP1Q14186 410 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 E4F1Q66K89 784 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-214ENST00000515035 INO80BQ9C086 356 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-214ENST00000515035 STRIP2Q9ULQ0 834 aa14.17□□□□□ -0.14
TCOF1-214ENST00000515035 KRT14P02533 472 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 CCDC159P0C7I6 412 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 KCNA3P22001 575 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 RAP1GDS1P52306 607 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 AP1B1Q10567 949 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 CEP55Q53EZ4 464 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 PI16Q6UXB8 463 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 ERICH1Q86X53 443 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 TTC13Q8NBP0 860 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 MASTLQ96GX5 879 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 CEP170P1Q96L14 293 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 IQGAP3Q86VI3 1631 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 HNRNPCL2B2RXH8 293 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 HNRNPCL1O60812 293 aaKnown RBP14.16□□□□□ -0.14
TCOF1-214ENST00000515035 HSPH1Q92598 858 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 SRP68Q9UHB9 627 aaKnown RBP14.16□□□□□ -0.14
TCOF1-214ENST00000515035 DYNLL1P63167 89 aaKnown RBP14.16□□□□□ -0.14
TCOF1-214ENST00000515035 PROM2Q8N271 834 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 LCORLQ8N3X6 602 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 DBNDD1Q9H9R9 158 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 OVOS2A0A0G2JMS6 1433 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 OVOS2A0A0J9YW53 1432 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 OVOS2Q6IE36 1432 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 SKOR1P84550 965 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 HIC1Q14526 733 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 FAM160B1Q5W0V3 765 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 TMEM154Q6P9G4 183 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.16□□□□□ -0.143e-9■■■■■ 78.5
TCOF1-214ENST00000515035 BHMT2Q9H2M3 363 aa14.16□□□□□ -0.14
TCOF1-214ENST00000515035 NGRNQ9NPE2 291 aaKnown RBP14.16□□□□□ -0.14
TCOF1-214ENST00000515035 GOLGA8IPA6NC78 632 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 GOLGA8JA6NMD2 632 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 XPOTO43592 962 aaKnown RBP14.15□□□□□ -0.14
TCOF1-214ENST00000515035 SLC16A2P36021 539 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 KCTD1Q719H9 257 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 RIN2Q8WYP3 895 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-214ENST00000515035 AMACRQ9UHK6 382 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 PRAMEF22A3QJZ6 481 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 PPP1R12AO14974 1030 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-214ENST00000515035 CYP27B1O15528 508 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 PMLP29590 882 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 IGBP1P78318 339 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 CCDC137Q6PK04 289 aaKnown RBP14.15□□□□□ -0.14
TCOF1-214ENST00000515035 BZW1Q7L1Q6 419 aaKnown RBP14.15□□□□□ -0.14
TCOF1-214ENST00000515035 CCNYL1Q8N7R7 359 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 RUBCNQ92622 972 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 PRMT1Q99873 361 aaKnown RBP14.15□□□□□ -0.14
TCOF1-214ENST00000515035 APOL6Q9BWW8 343 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 PSD3Q9NYI0 1048 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.15□□□□□ -0.14
TCOF1-214ENST00000515035 JCADQ9P266 1359 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 TTLL1O95922 423 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 KCNJ6P48051 423 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 TFDP2Q14188 446 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 CNGA3Q16281 694 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 CDO1Q16878 200 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 AGGF1Q8N302 714 aaeCLIP14.15□□□□□ -0.14
TCOF1-214ENST00000515035 MXD3Q9BW11 206 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 WWP1Q9H0M0 922 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 CLRN2A0PK11 232 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 PHF20L1A8MW92 1017 aa14.15□□□□□ -0.14
TCOF1-214ENST00000515035 E9PMD0 336 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms