RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 KAT2BQ92831 832 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 NTPCRQ9BSD7 190 aaKnown RBP21.69■■□□□ 1.06
SSBP2-218ENST00000514493 SRRTQ9BXP5 876 aaKnown RBP21.69■■□□□ 1.06
SSBP2-218ENST00000514493 TYW1Q9NV66 732 aaKnown RBP21.69■■□□□ 1.06
SSBP2-218ENST00000514493 IMPACTQ9P2X3 320 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 TRIM17Q9Y577 477 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 SLC16A4O15374 487 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 C22orf31O95567 290 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 C6orf222P0C671 652 aaPredicted RBP21.69■■□□□ 1.06
SSBP2-218ENST00000514493 EEF1GP26641 437 aaKnown RBP21.69■■□□□ 1.06
SSBP2-218ENST00000514493 GTF2BQ00403 316 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 KCNA1Q09470 495 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 PPP2R5AQ15172 486 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 EDRF1Q3B7T1 1238 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 LRRC55Q6ZSA7 311 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 HAUS6Q7Z4H7 955 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 IRF2BP1Q8IU81 584 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 TMEM161BQ8NDZ6 487 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 TCP11Q8WWU5 503 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 HVCN1Q96D96 273 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 KMT5AQ9NQR1 393 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 KCNG1Q9UIX4 513 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 TRAF3IP3Q9Y228 551 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 MYADML2A6NDP7 307 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 CCDC169A6NNP5 214 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 PDXKO00764 312 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 GLRA2P23416 452 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 NAMPTP43490 491 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 PPFIA1Q13136 1202 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 KRT31Q15323 416 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 COL13A1Q5TAT6 717 aaPredicted RBP21.68■■□□□ 1.06
SSBP2-218ENST00000514493 IER5Q5VY09 327 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 CCDC186Q7Z3E2 898 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 TMC6Q7Z403 805 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 ZSCAN30Q86W11 494 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 FAM114A1Q8IWE2 563 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 ZC3H3Q8IXZ2 948 aaKnown RBP21.68■■□□□ 1.06
SSBP2-218ENST00000514493 KIFC3Q9BVG8 833 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 SPC25Q9HBM1 224 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 ADGRA3Q8IWK6 1321 aa21.68■■□□□ 1.06
SSBP2-218ENST00000514493 LRRC10BA6NIK2 292 aa21.67■■□□□ 1.06
SSBP2-218ENST00000514493 H0YCG3 227 aa21.67■■□□□ 1.06
SSBP2-218ENST00000514493 HAS3O00219 553 aa21.67■■□□□ 1.06
SSBP2-218ENST00000514493 MAGEB2O15479 319 aa21.67■■□□□ 1.06
SSBP2-218ENST00000514493 CALUO43852 315 aaPredicted RBP21.67■■□□□ 1.06
SSBP2-218ENST00000514493 MYL3P08590 195 aa21.67■■□□□ 1.06
SSBP2-218ENST00000514493 DRP2Q13474 957 aa21.67■■□□□ 1.06
SSBP2-218ENST00000514493 FILIP1LQ4L180 1135 aa21.67■■□□□ 1.06
SSBP2-218ENST00000514493 VSTM4Q8IW00 320 aa21.67■■□□□ 1.06
SSBP2-218ENST00000514493 KCNN1Q92952 543 aa21.67■■□□□ 1.06
SSBP2-218ENST00000514493 KATNAL1Q9BW62 490 aa21.67■■□□□ 1.06
SSBP2-218ENST00000514493 ARHGAP28Q9P2N2 729 aa21.67■■□□□ 1.06
SSBP2-218ENST00000514493 MAGEC2Q9UBF1 373 aaPredicted RBP21.67■■□□□ 1.06
SSBP2-218ENST00000514493 ZKSCAN5Q9Y2L8 839 aa21.67■■□□□ 1.06
SSBP2-218ENST00000514493 ADAMTS4O75173 837 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 FGFR1OPO95684 399 aaKnown RBP21.66■■□□□ 1.06
SSBP2-218ENST00000514493 INHAP05111 366 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 IGBP1P78318 339 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 PURAQ00577 322 aaKnown RBP21.66■■□□□ 1.06
SSBP2-218ENST00000514493 FKBP3Q00688 224 aaKnown RBP21.66■■□□□ 1.06
SSBP2-218ENST00000514493 MKRN4PQ13434 485 aaPredicted RBP21.66■■□□□ 1.06
SSBP2-218ENST00000514493 MFSD10Q14728 455 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 NR1I3Q14994 352 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 GRIK4Q16099 956 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 KIAA0753Q2KHM9 967 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 FILIP1Q7Z7B0 1213 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 KSR1Q8IVT5 923 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 LRRC71Q8N4P6 559 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 RETREG2Q8NC44 543 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 PSPC1Q8WXF1 523 aaKnown RBP21.66■■□□□ 1.06
SSBP2-218ENST00000514493 TMEM206Q9H813 350 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 SUGCTQ9HAC7 445 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 XPNPEP3Q9NQH7 507 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.66■■□□□ 1.06
SSBP2-218ENST00000514493 TGFB1I1O43294 461 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 KPNA6O60684 536 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 SCP2P22307 547 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 ABCD1P33897 745 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 PSEN2P49810 448 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 LINC01465Q8N7H1 131 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 CEP63Q96MT8 703 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 ACCSQ96QU6 501 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 GBP3Q9H0R5 595 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 PTCH2Q9Y6C5 1203 aa21.66■■□□□ 1.06
SSBP2-218ENST00000514493 ESPNB1AK53 854 aa21.65■■□□□ 1.06
SSBP2-218ENST00000514493 PGK1P00558 417 aa21.65■■□□□ 1.06
SSBP2-218ENST00000514493 GRK4P32298 578 aa21.65■■□□□ 1.06
SSBP2-218ENST00000514493 COPB1P53618 953 aaKnown RBP21.65■■□□□ 1.06
SSBP2-218ENST00000514493 GSDMDP57764 484 aa21.65■■□□□ 1.06
SSBP2-218ENST00000514493 CAPSQ13938 189 aa21.65■■□□□ 1.06
SSBP2-218ENST00000514493 NFIL3Q16649 462 aa21.65■■□□□ 1.06
SSBP2-218ENST00000514493 EFCAB12Q6NXP0 572 aa21.65■■□□□ 1.06
SSBP2-218ENST00000514493 MAP4K3Q8IVH8 894 aa21.65■■□□□ 1.06
SSBP2-218ENST00000514493 CNOT6LQ96LI5 555 aaKnown RBP21.65■■□□□ 1.06
SSBP2-218ENST00000514493 RTN4Q9NQC3 1192 aaKnown RBP21.65■■□□□ 1.06
SSBP2-218ENST00000514493 DDX20Q9UHI6 824 aaKnown RBP21.65■■□□□ 1.06
SSBP2-218ENST00000514493 DENND3A2RUS2 1198 aa21.64■■□□□ 1.06
SSBP2-218ENST00000514493 RRN3P2A6NIE6 340 aa21.64■■□□□ 1.06
SSBP2-218ENST00000514493 SMIM10L2AP0DMW4 78 aa21.64■■□□□ 1.06
SSBP2-218ENST00000514493 SMIM10L2BP0DMW5 78 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms