RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	POFUT1	Q9H488	388 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	MTG2	Q9H4K7	406 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	PLA2G3	Q9NZ20	509 aa		5.99	□□□□□ -1.45
MATR3-223	ENST00000514402	ST20-MTHFS	A0A0A6YYL1	179 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	MATN3	O15232	486 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	FSBP	O95073	299 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	MYCLP1	P12525	358 aa	Predicted RBP	5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	GPR15	P49685	360 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	RIN1	Q13671	783 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	GRM7	Q14831	915 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	TERF2	Q15554	542 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	SDE2	Q6IQ49	451 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	KRTAP5-3	Q6L8H2	238 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	CLEC14A	Q86T13	490 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	GPR135	Q8IZ08	494 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	PLA2G15	Q8NCC3	412 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	PPP1R14C	Q8TAE6	165 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	RSAD2	Q8WXG1	361 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	GPR101	Q96P66	508 aa	Predicted RBP	5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	ADO	Q96SZ5	270 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	MSRA	Q9UJ68	235 aa		5.98	□□□□□ -1.45
MATR3-223	ENST00000514402	C2orf78	A6NCI8	922 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	MTSS1	O43312	755 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	ZEB2	O60315	1214 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	CLSTN1	O94985	981 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	VSIG10L2	P0DP72	767 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	BPI	P17213	487 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	ADCYAP1R1	P41586	468 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	HHEX	Q03014	270 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	TCIRG1	Q13488	830 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	GIMAP6	Q6P9H5	292 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402		Q6ZSN1	163 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	FRMD7	Q6ZUT3	714 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	THNSL2	Q86YJ6	484 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	PALM2	Q8IXS6	379 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	CDYL2	Q8N8U2	506 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	FERMT2	Q96AC1	680 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	NOL10	Q9BSC4	688 aa	Known RBP	5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	C14orf93	Q9H972	538 aa	Known RBP	5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	EMC7	Q9NPA0	242 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	SPTLC3	Q9NUV7	552 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.97	□□□□□ -1.45
MATR3-223	ENST00000514402	MYPN	Q86TC9	1320 aa		5.97	□□□□□ -1.45
MATR3-223	ENST00000514402		A0A1W2PRX2	142 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	CYP27B1	O15528	508 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	ULK1	O75385	1050 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	APOL3	O95236	402 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	JUN	P05412	331 aa	Known RBP	5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	ACO1	P21399	889 aa	Known RBP	5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	BPIFB4	P59827	614 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	ADAM8	P78325	824 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	ATP2C1	P98194	919 aa	Predicted RBP	5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	FOXL1	Q12952	345 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	RNF180	Q86T96	592 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	UNC5B	Q8IZJ1	945 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	LEO1	Q8WVC0	666 aa	Predicted RBP	5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	USP7	Q93009	1102 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	IFT22	Q9H7X7	185 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	KCNG1	Q9UIX4	513 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	APOBEC2	Q9Y235	224 aa	Known RBP	5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	PCDHB6	Q9Y5E3	794 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	RBM8A	Q9Y5S9	174 aa	Known RBP	5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	NUMBL	Q9Y6R0	609 aa		5.96	□□□□□ -1.46
MATR3-223	ENST00000514402	ELL2	O00472	640 aa	Predicted RBP	5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	NRP2	O60462	931 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	PFKM	P08237	780 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	MSX2	P35548	267 aa	Predicted RBP	5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	SOX5	P35711	763 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	KIR2DL3	P43628	341 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	DDB1	Q16531	1140 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	SPDYA	Q5MJ70	313 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	UNQ6494/PRO21346	Q6UXR6	183 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	DDX46	Q7L014	1031 aa	Known RBP	5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	RASSF3	Q86WH2	238 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	ANKRD53	Q8N9V6	530 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	SLC5A5	Q92911	643 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	ZNF496	Q96IT1	587 aa	Predicted RBP	5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	TTC1	Q99614	292 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	CAAP1	Q9H8G2	361 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	DNAI1	Q9UI46	699 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	MAGEL2	Q9UJ55	1249 aa		5.95	□□□□□ -1.46
MATR3-223	ENST00000514402	RAB11FIP3	O75154	756 aa		5.94	□□□□□ -1.46
MATR3-223	ENST00000514402	ACRV1	P26436	265 aa		5.94	□□□□□ -1.46
MATR3-223	ENST00000514402	STAT3	P40763	770 aa		5.94	□□□□□ -1.46
MATR3-223	ENST00000514402	SAFB2	Q14151	953 aa	Known RBP eCLIP	5.94	□□□□□ -1.46
MATR3-223	ENST00000514402	ATP13A4	Q4VNC1	1196 aa		5.94	□□□□□ -1.46
MATR3-223	ENST00000514402	ZBTB41	Q5SVQ8	909 aa		5.94	□□□□□ -1.46
MATR3-223	ENST00000514402	CXorf67	Q86X51	503 aa	Predicted RBP	5.94	□□□□□ -1.46
MATR3-223	ENST00000514402	ANKRD35	Q8N283	1001 aa		5.94	□□□□□ -1.46
MATR3-223	ENST00000514402	GPHA2	Q96T91	129 aa		5.94	□□□□□ -1.46
MATR3-223	ENST00000514402	AGO3	Q9H9G7	860 aa	Known RBP	5.94	□□□□□ -1.46
MATR3-223	ENST00000514402		A0A0A6YYK5	440 aa	Predicted RBP	5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	GOLGA8B	A8MQT2	603 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	NRP1	O14786	923 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	BRINP1	O60477	761 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	TOX4	O94842	621 aa		5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	SEC24D	O94855	1032 aa	Predicted RBP	5.93	□□□□□ -1.46
MATR3-223	ENST00000514402	XPA	P23025	273 aa	Predicted RBP	5.93	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms