RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 LIMS2Q7Z4I7 341 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 WDR75Q8IWA0 830 aaKnown RBP4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 RTKN2Q8IZC4 609 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 MYO1HQ8N1T3 1032 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 NXPE1Q8N323 547 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 EFHBQ8N7U6 833 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 ASB15Q8WXK1 588 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 HOOK2Q96ED9 719 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 FAM89AQ96GI7 184 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 CCDC8Q9H0W5 538 aaPredicted RBP4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 OR10A2Q9H208 303 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 PCIF1Q9H4Z3 704 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 EMC7Q9NPA0 242 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 AURKAIP1Q9NWT8 199 aaPredicted RBP4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 GOLGA6AQ9NYA3 693 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 PUF60Q9UHX1 559 aaKnown RBP4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 OAZ3Q9UMX2 235 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 COQ6Q9Y2Z9 468 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 NR2E1Q9Y466 385 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 RIPOR2Q9Y4F9 1068 aa4.5□□□□□ -1.69
CALCOCO2-223ENST00000514267 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 SCDO00767 359 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 GPR42O15529 346 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 ARHGAP6O43182 974 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 TPD52L2O43399 206 aaKnown RBP4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZNF623O75123 536 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 RAD17O75943 681 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 ATP2A2P16615 1042 aaKnown RBP4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 CR2P20023 1033 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 KPNA1P52294 538 aaPredicted RBP4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 ERVK-21P61565 698 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 ADCY1Q08828 1119 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 KLF1Q13351 362 aaPredicted RBP4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 PRKD1Q15139 912 aaPredicted RBP4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 INAVAQ3KP66 663 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 CXorf57Q6NSI4 855 aaKnown RBP4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 USP30Q70CQ3 517 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 POLNQ7Z5Q5 900 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZZZ3Q8IYH5 903 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 COG1Q8WTW3 980 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 GFM2Q969S9 779 aaKnown RBP4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 GPR101Q96P66 508 aaPredicted RBP4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 GBP4Q96PP9 640 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 SMAD5Q99717 465 aaKnown RBP4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 MYH16Q9H6N6 1097 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 CD248Q9HCU0 757 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 THG1LQ9NWX6 298 aaKnown RBP4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 JAG2Q9Y219 1238 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 SLC30A1Q9Y6M5 507 aa4.49□□□□□ -1.69
CALCOCO2-223ENST00000514267 TNKSO95271 1327 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 PTPDC1A2A3K4 754 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 CYP27B1O15528 508 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 PLIN1O60240 522 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 H2AFYO75367 372 aaKnown RBP4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 CFBP00751 764 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 KRT18P05783 430 aaKnown RBP4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 MMEP08473 750 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 INSRRP14616 1297 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 COMTP21964 271 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 PHC1P78364 1004 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 HHEXQ03014 270 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 PUM1Q14671 1186 aaKnown RBP eCLIP4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 LRRC41Q15345 812 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 GPR158Q5T848 1215 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 AGBL4Q5VU57 503 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 KANK2Q63ZY3 851 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 CBARPQ8N350 705 aaPredicted RBP4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 CHTF18Q8WVB6 975 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 RPGRQ92834 1020 aaKnown RBP4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 EDAQ92838 391 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 SLC5A5Q92911 643 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 AHCYL2Q96HN2 611 aaKnown RBP4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 RTFDC1Q9BY42 306 aaPredicted RBP4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 KRTAP3-1Q9BYR8 98 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZNF180Q9UJW8 692 aa4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZFR2Q9UPR6 939 aaKnown RBP4.48□□□□□ -1.69
CALCOCO2-223ENST00000514267 WASHC2AQ641Q2 1341 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 GOLGA6L22H0YM25 854 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 EIF3JO75822 258 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 MYL1P05976 194 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZSCAN20P17040 1043 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 ATF3P18847 181 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 RECQLP46063 649 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 KCNQ1P51787 676 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 BCAR1P56945 870 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 ALDH6A1Q02252 535 aaKnown RBP4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 HDAC1Q13547 482 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 TMEM132BQ14DG7 1078 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 EPHA7Q15375 998 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 DDB1Q16531 1140 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 GFOD2Q3B7J2 385 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 TMEM240Q5SV17 173 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 GORABQ5T7V8 394 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 CREB3L3Q68CJ9 461 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 TRIM68Q6AZZ1 485 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 KLHDC10Q6PID8 442 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 GPR155Q7Z3F1 870 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 ADGRE4PQ86SQ3 457 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 TAX1BP1Q86VP1 789 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms