RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 TREHO43280 583 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 C22orf31O95567 290 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 IDEP14735 1019 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 RAG1P15918 1043 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 PSMD2Q13200 908 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 PTK7Q13308 1070 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 BFSP2Q13515 415 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 GIT2Q14161 759 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 CAMK4Q16566 473 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 ARSHQ5FYA8 562 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 HERC4Q5GLZ8 1057 aaPredicted RBP11.23□□□□□ -0.61
NEDD9-214ENST00000513989 MARCH8Q5T0T0 291 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 CCDC183Q5T5S1 534 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 GDF6Q6KF10 455 aaPredicted RBP11.23□□□□□ -0.61
NEDD9-214ENST00000513989 MYCT1Q8N699 235 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 CCDC155Q8N6L0 562 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 TRAPPC12Q8WVT3 735 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 GSDMAQ96QA5 445 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 RUSC1Q9BVN2 902 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 COL25A1Q9BXS0 654 aaPredicted RBP11.23□□□□□ -0.61
NEDD9-214ENST00000513989 TRIM9Q9C026 710 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 CLSTN2Q9H4D0 955 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 PARVGQ9HBI0 331 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 TMEM39AQ9NV64 488 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 PANK4Q9NVE7 773 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 SEL1LQ9UBV2 794 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 AKT3Q9Y243 479 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 GRIN2DO15399 1336 aa11.23□□□□□ -0.61
NEDD9-214ENST00000513989 HIP1RO75146 1068 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 CAND2O75155 1236 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 KIF20AO95235 890 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 TIMP1P01033 207 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 RPN1P04843 607 aaKnown RBP11.22□□□□□ -0.61
NEDD9-214ENST00000513989 PLS3P13797 630 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 HOXC8P31273 242 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 ARL2P36404 184 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 ADAM17P78536 824 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 FPGSQ05932 587 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 RAD51AP2Q09MP3 1159 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 DMP1Q13316 513 aaPredicted RBP11.22□□□□□ -0.61
NEDD9-214ENST00000513989 CUL4BQ13620 913 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 PHLPP2Q6ZVD8 1323 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 STXBP4Q6ZWJ1 553 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 UNC13DQ70J99 1090 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
NEDD9-214ENST00000513989 FAM126BQ8IXS8 530 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 KIAA0319LQ8IZA0 1049 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 LRRC71Q8N4P6 559 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 PRPF31Q8WWY3 499 aaKnown RBP11.22□□□□□ -0.61
NEDD9-214ENST00000513989 MYLIPQ8WY64 445 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 TMEM143Q96AN5 459 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 RNPC3Q96LT9 517 aaKnown RBP11.22□□□□□ -0.61
NEDD9-214ENST00000513989 SCLT1Q96NL6 688 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 CEP89Q96ST8 783 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 INO80BQ9C086 356 aaPredicted RBP11.22□□□□□ -0.61
NEDD9-214ENST00000513989 BLZF1Q9H2G9 400 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 EXOC1Q9NV70 894 aa11.22□□□□□ -0.61
NEDD9-214ENST00000513989 NPHP3-ACAD11A0A0J9YXS1 232 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 CCDC169A6NNP5 214 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 SFI1A8K8P3 1242 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 CD4P01730 458 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 SRGAP2CP0DJJ0 459 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 THPOP40225 353 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 EFNA5P52803 228 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 ZNF200P98182 395 aaPredicted RBP11.21□□□□□ -0.61
NEDD9-214ENST00000513989 NCBP1Q09161 790 aaKnown RBP11.21□□□□□ -0.61
NEDD9-214ENST00000513989 DPYDQ12882 1025 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 PNOCQ13519 176 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 KCNB1Q14721 858 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 ODR4Q5SWX8 454 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 RASIP1Q5U651 963 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 RPAINQ86UA6 219 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 SERINC5Q86VE9 423 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 RHPN2Q8IUC4 686 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 ZBTB8OSQ8IWT0 167 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 FAM178BQ8IXR5 827 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 GRAMD1CQ8IYS0 662 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 CAGE1Q8TC20 777 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 LRRC15Q8TF66 581 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 DNAJB3Q8WWF6 145 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 SPIRE2Q8WWL2 714 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.21□□□□□ -0.61
NEDD9-214ENST00000513989 REEP2Q9BRK0 252 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 FAM49AQ9H0Q0 323 aaPredicted RBP11.21□□□□□ -0.61
NEDD9-214ENST00000513989 TRPV6Q9H1D0 765 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 POLR3FQ9H1D9 316 aaPredicted RBP11.21□□□□□ -0.61
NEDD9-214ENST00000513989 C2orf40Q9H1Z8 148 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 KMT5AQ9NQR1 393 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 TRMT13Q9NUP7 481 aaKnown RBP11.21□□□□□ -0.61
NEDD9-214ENST00000513989 KIAA1468Q9P260 1216 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 PCDHB13Q9Y5F0 798 aa11.21□□□□□ -0.61
NEDD9-214ENST00000513989 BRWD1Q9NSI6 2320 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 UMODL1Q5DID0 1318 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 B4GALT4O60513 344 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 MAPTP10636 758 aaKnown RBP11.2□□□□□ -0.62
NEDD9-214ENST00000513989 CSF2RAP15509 400 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 NAMPTP43490 491 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 PHKA2P46019 1235 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 CLCN3P51790 818 aa11.2□□□□□ -0.62
NEDD9-214ENST00000513989 ZNF131P52739 623 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms