RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 TRIM50Q86XT4 487 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 ABI1Q8IZP0 508 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 DEFB124Q8NES8 71 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 SMG7Q92540 1137 aaKnown RBP8.89□□□□□ -0.99
CLDND1-229ENST00000513988 FGF14Q92915 247 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 PHKBQ93100 1093 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 ADAM2Q99965 735 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 RHOBTB2Q9BYZ6 727 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 ZNF287Q9HBT7 754 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 TUBE1Q9UJT0 475 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 NDRG2Q9UN36 371 aaKnown RBP8.89□□□□□ -0.99
CLDND1-229ENST00000513988 SRPK3Q9UPE1 567 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 SALL2Q9Y467 1007 aaPredicted RBP8.89□□□□□ -0.99
CLDND1-229ENST00000513988 PCDHGA5Q9Y5G8 931 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 TRPV2Q9Y5S1 764 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 CACNA1EQ15878 2313 aa8.89□□□□□ -0.99
CLDND1-229ENST00000513988 F5P12259 2224 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 IGSF9BQ9UPX0 1349 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 CREBBPQ92793 2442 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 FAM221BA6H8Z2 402 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 CAPN8A6NHC0 703 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 SHISA7A6NL88 538 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 MINDY4BA8MYZ0 360 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 H0Y626 953 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 INPPL1O15357 1258 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 HOXA2O43364 376 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 MGEA5O60502 916 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 TRIM16O95361 564 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 RPLP2P05387 115 aaKnown RBP8.88□□□□□ -0.99
CLDND1-229ENST00000513988 TSPY3P0CV98 308 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 TSPY8P0CW00 308 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 EIF2AK2P19525 551 aaKnown RBP8.88□□□□□ -0.99
CLDND1-229ENST00000513988 UBA1P22314 1058 aaKnown RBP8.88□□□□□ -0.99
CLDND1-229ENST00000513988 METAP2P50579 478 aaKnown RBP eCLIP8.88□□□□□ -0.99
CLDND1-229ENST00000513988 POLGP54098 1239 aaPredicted RBP8.88□□□□□ -0.99
CLDND1-229ENST00000513988 TMEM266Q2M3C6 531 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 TYW1BQ6NUM6 668 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 PARM1Q6UWI2 310 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 RGS22Q8NE09 1264 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 SYTL5Q8TDW5 730 aaPredicted RBP8.88□□□□□ -0.99
CLDND1-229ENST00000513988 CRELD1Q96HD1 420 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 EMILIN2Q9BXX0 1053 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 FAM49AQ9H0Q0 323 aaPredicted RBP8.88□□□□□ -0.99
CLDND1-229ENST00000513988 PIDD1Q9HB75 910 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 MAN1C1Q9NR34 630 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 TMEM161AQ9NX61 479 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 KCNK4Q9NYG8 393 aa8.88□□□□□ -0.99
CLDND1-229ENST00000513988 ZFP37Q9Y6Q3 630 aaPredicted RBP8.88□□□□□ -0.99
CLDND1-229ENST00000513988 C2CD3Q4AC94 2353 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 C9IYK1 514 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 NT5C1B-RDH14C9J2C7 533 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 CAPN9O14815 690 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 NR3C2P08235 984 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 GNAI3P08754 354 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 RAP1GAPP47736 663 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 ALDH7A1P49419 539 aaKnown RBP8.87□□□□□ -0.99
CLDND1-229ENST00000513988 PPFIA1Q13136 1202 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 SBK1Q52WX2 424 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 UTP14CQ5TAP6 766 aaKnown RBP8.87□□□□□ -0.99
CLDND1-229ENST00000513988 TTBK2Q6IQ55 1244 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 MTSS1LQ765P7 747 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 CACNA2D4Q7Z3S7 1137 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 CHCHD4Q8N4Q1 142 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 LSM14AQ8ND56 463 aaKnown RBP8.87□□□□□ -0.99
CLDND1-229ENST00000513988 NEDD1Q8NHV4 660 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 CCER1Q8TC90 406 aaPredicted RBP8.87□□□□□ -0.99
CLDND1-229ENST00000513988 CASD1Q96PB1 797 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 SLC32A1Q9H598 525 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 RGS18Q9NS28 235 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 COL20A1Q9P218 1284 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 DPP7Q9UHL4 492 aa8.87□□□□□ -0.99
CLDND1-229ENST00000513988 PLIN4Q96Q06 1357 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 WDR19Q8NEZ3 1342 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 PNMA6EA0A0J9YXQ4 647 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 PPP1R3GB7ZBB8 358 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 PYCARD-AS1I3L0S3 204 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 SIM1P81133 766 aaPredicted RBP8.86□□□□□ -0.99
CLDND1-229ENST00000513988 SP2Q02086 613 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 TMEM62Q0P6H9 643 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 USH1GQ495M9 461 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 SLFNL1Q499Z3 407 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 BTNL9Q6UXG8 535 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 FAM43BQ6ZT52 329 aaPredicted RBP8.86□□□□□ -0.99
CLDND1-229ENST00000513988 KBTBD6Q86V97 674 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 MDM1Q8TC05 714 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 DCAF4Q8WV16 495 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 SSH1Q8WYL5 1049 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 ELAC1Q9H777 363 aaKnown RBP8.86□□□□□ -0.99
CLDND1-229ENST00000513988 LMAN1LQ9HAT1 526 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 TMEM9BQ9NQ34 198 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 JADE2Q9NQC1 790 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 STX8Q9UNK0 236 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 PTPRQQ9UMZ3 2332 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 PCNX2A6NKB5 2137 aa8.86□□□□□ -0.99
CLDND1-229ENST00000513988 SPAARA0A1B0GVQ0 90 aa8.85□□□□□ -0.99
CLDND1-229ENST00000513988 MBLAC1A4D2B0 266 aaPredicted RBP8.85□□□□□ -0.99
CLDND1-229ENST00000513988 ENO4A6NNW6 628 aa8.85□□□□□ -0.99
CLDND1-229ENST00000513988 GOLIM4O00461 696 aa8.85□□□□□ -0.99
CLDND1-229ENST00000513988 MAN2B1O00754 1011 aa8.85□□□□□ -0.99
CLDND1-229ENST00000513988 RFPL2O75678 378 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms