RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 AMHR2Q16671 573 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 MCTP1Q6DN14 999 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 POTEGQ6S5H5 508 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 DTHD1Q6ZMT9 781 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 SRGAP1Q7Z6B7 1085 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 RHPN2Q8IUC4 686 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 CMTR2Q8IYT2 770 aaKnown RBP10.82□□□□□ -0.68
RNF4-221ENST00000513643 MAFAQ8NHW3 353 aaPredicted RBP10.82□□□□□ -0.68
RNF4-221ENST00000513643 ERMNQ8TAM6 284 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 ASAP3Q8TDY4 903 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 TCP11Q8WWU5 503 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 NLRP7Q8WX94 980 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 ARNTL2Q8WYA1 636 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 ZNF668Q96K58 619 aaPredicted RBP10.82□□□□□ -0.68
RNF4-221ENST00000513643 YME1L1Q96TA2 773 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 MTRQ99707 1265 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 C17orf80Q9BSJ5 609 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 INO80BQ9C086 356 aaPredicted RBP10.82□□□□□ -0.68
RNF4-221ENST00000513643 TMEM161AQ9NX61 479 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 LRWD1Q9UFC0 647 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 BRWD1Q9NSI6 2320 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 MYO7AQ13402 2215 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 ADGRA3Q8IWK6 1321 aa10.82□□□□□ -0.68
RNF4-221ENST00000513643 H3BNC9 293 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 EOMESO95936 686 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 RB1P06400 928 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 FGFR4P22455 802 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 GLRA2P23416 452 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 BMPR1AP36894 532 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 PTPAQ15257 358 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 PCBP1Q15365 356 aaKnown RBP eCLIP10.81□□□□□ -0.68
RNF4-221ENST00000513643 EPC2Q52LR7 807 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 HAUS3Q68CZ6 603 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 ECHDC2Q86YB7 292 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 TMEM192Q8IY95 271 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 PNMA5Q96PV4 448 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 GAS2L1Q99501 681 aaPredicted RBP10.81□□□□□ -0.68
RNF4-221ENST00000513643 CERS4Q9HA82 394 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 ATP6V0A4Q9HBG4 840 aa10.81□□□□□ -0.68
RNF4-221ENST00000513643 DENND3A2RUS2 1198 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 PP2D1A8MPX8 630 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 SLC26A4O43511 780 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 SFPQP23246 707 aaKnown RBP eCLIP10.8□□□□□ -0.68
RNF4-221ENST00000513643 CDC25AP30304 524 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 CCT6AP40227 531 aaKnown RBP10.8□□□□□ -0.68
RNF4-221ENST00000513643 CAPSQ13938 189 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 UBXN11Q5T124 520 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 FAM102BQ5T8I3 360 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 CDCA2Q69YH5 1023 aaPredicted RBP10.8□□□□□ -0.68
RNF4-221ENST00000513643 PADI6Q6TGC4 694 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 LRRC55Q6ZSA7 311 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 KCNK18Q7Z418 384 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 MRPL10Q7Z7H8 261 aaKnown RBP10.8□□□□□ -0.68
RNF4-221ENST00000513643 FIBCD1Q8N539 461 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 RNF149Q8NC42 400 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 MCPH1Q8NEM0 835 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 NLRP4Q96MN2 994 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 CASD1Q96PB1 797 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 PLVAPQ9BX97 442 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 RAB34Q9BZG1 259 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 AGPAT5Q9NUQ2 364 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 RNF216Q9NWF9 866 aaPredicted RBP10.8□□□□□ -0.68
RNF4-221ENST00000513643 KIAA1024Q9UPX6 916 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 PCDHB7Q9Y5E2 793 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 MRPL42Q9Y6G3 142 aaKnown RBP10.8□□□□□ -0.68
RNF4-221ENST00000513643 NCOR1O75376 2440 aa10.8□□□□□ -0.68
RNF4-221ENST00000513643 STX6O43752 255 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 EYA4O95677 639 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 BMP15O95972 392 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 SRGAP2CP0DJJ0 459 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 ZSCAN20P17040 1043 aaPredicted RBP10.79□□□□□ -0.68
RNF4-221ENST00000513643 PHKA2P46019 1235 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 GATMP50440 423 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 MBTD1Q05BQ5 628 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 CAMK1Q14012 370 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 COL19A1Q14993 1142 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 SF3A1Q15459 793 aaKnown RBP10.79□□□□□ -0.68
RNF4-221ENST00000513643 TMEM119Q4V9L6 283 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 NAALADL2Q58DX5 795 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 KRT79Q5XKE5 535 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 C1orf186Q6ZWK4 172 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 DAW1Q8N136 415 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 SNX29Q8TEQ0 813 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 LRRC15Q8TF66 581 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 BSNDQ8WZ55 320 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 KCNN1Q92952 543 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 P2RX5Q93086 422 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 AK8Q96MA6 479 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 TMEM117Q9H0C3 514 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 BHMT2Q9H2M3 363 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 FZD8Q9H461 694 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 CWH43Q9H720 699 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 GPRC5CQ9NQ84 441 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 BMP2KQ9NSY1 1161 aaPredicted RBP10.79□□□□□ -0.68
RNF4-221ENST00000513643 DDX19AQ9NUU7 478 aaKnown RBP10.79□□□□□ -0.68
RNF4-221ENST00000513643 DACT1Q9NYF0 836 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 RWDD3Q9Y3V2 267 aa10.79□□□□□ -0.68
RNF4-221ENST00000513643 A0A1B0GUA9 196 aa10.78□□□□□ -0.68
RNF4-221ENST00000513643 E9PMD0 336 aa10.78□□□□□ -0.68
RNF4-221ENST00000513643 INPPL1O15357 1258 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms