RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 SLC44A3Q8N4M1 653 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 LRRC71Q8N4P6 559 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 NCOA7Q8NI08 942 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 KLHL5Q96PQ7 755 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 MAP3K14Q99558 947 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 VN1R3Q9BXE9 311 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 EMILIN2Q9BXX0 1053 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 FOXQ1Q9C009 403 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 GBP3Q9H0R5 595 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 ADAMTS10Q9H324 1103 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 CDV3Q9UKY7 258 aaKnown RBP11.92□□□□□ -0.5
CLDND1-227ENST00000513452 INPP5FQ9Y2H2 1132 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 EVPLQ92817 2033 aa11.92□□□□□ -0.5
CLDND1-227ENST00000513452 CHD8Q9HCK8 2581 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 FANCMQ8IYD8 2048 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 E7EWF7 191 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 CNPP09543 421 aaKnown RBP11.91□□□□□ -0.5
CLDND1-227ENST00000513452 GLULP15104 373 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 RXRAP19793 462 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 SDHBP21912 280 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 SMARCA1P28370 1054 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 GNAQP50148 359 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 ATXN1P54253 815 aaKnown RBP11.91□□□□□ -0.5
CLDND1-227ENST00000513452 RNASELQ05823 741 aaKnown RBP11.91□□□□□ -0.5
CLDND1-227ENST00000513452 HDAC1Q13547 482 aaPredicted RBP11.91□□□□□ -0.5
CLDND1-227ENST00000513452 VARS2Q5ST30 1063 aaKnown RBP11.91□□□□□ -0.5
CLDND1-227ENST00000513452 KIAA0319Q5VV43 1072 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 B4GALNT3Q6L9W6 998 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 PHLDB3Q6NSJ2 640 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 PJA1Q8NG27 643 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 IGDCC4Q8TDY8 1250 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 BBXQ8WY36 941 aaPredicted RBP11.91□□□□□ -0.5
CLDND1-227ENST00000513452 LPPQ93052 612 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 MYADMQ96S97 322 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 NRDE2Q9H7Z3 1164 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 LY9Q9HBG7 655 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 MAN1C1Q9NR34 630 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 TBC1D13Q9NVG8 400 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 DACT1Q9NYF0 836 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 DNAJB4Q9UDY4 337 aa11.91□□□□□ -0.5
CLDND1-227ENST00000513452 USP24Q9UPU5 2620 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 DCDC2BA2VCK2 349 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 MEIS1O00470 390 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 SPTLC1O15269 473 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 LRRN2O75325 713 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 GALTP07902 379 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 MYBP10242 640 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 DARSP14868 501 aaKnown RBP11.9□□□□□ -0.5
CLDND1-227ENST00000513452 SLC11A1P49279 550 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 GPC3P51654 580 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 NOMO2Q5JPE7 1267 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 EFCAB12Q6NXP0 572 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 DCLRE1AQ6PJP8 1040 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 GLB1LQ6UWU2 654 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 NFXL1Q6ZNB6 911 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 RAB11FIP4Q86YS3 637 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 MAML2Q8IZL2 1156 aaPredicted RBP11.9□□□□□ -0.5
CLDND1-227ENST00000513452 CCDC82Q8N4S0 544 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 CMASQ8NFW8 434 aaPredicted RBP11.9□□□□□ -0.5
CLDND1-227ENST00000513452 STAMQ92783 540 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 ANO3Q9BYT9 981 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 OSBPL3Q9H4L5 887 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 WDR6Q9NNW5 1121 aaKnown RBP11.9□□□□□ -0.5
CLDND1-227ENST00000513452 EPS15L1Q9UBC2 864 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 CEP131Q9UPN4 1083 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 CHD6Q8TD26 2715 aa11.9□□□□□ -0.5
CLDND1-227ENST00000513452 CCDC195A0A1B0GUA6 201 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 CARNS1A5YM72 827 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 INPPL1O15357 1258 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 MAGEB2O15479 319 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 B4GALT3O60512 393 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 CSDE1O75534 798 aaKnown RBP11.89□□□□□ -0.51
CLDND1-227ENST00000513452 TMOD1P28289 359 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 ZNF76P36508 570 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 PHKA2P46019 1235 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 LMNB2Q03252 620 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 PTH1RQ03431 593 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 MB21D2Q8IYB1 491 aaPredicted RBP11.89□□□□□ -0.51
CLDND1-227ENST00000513452 GPR161Q8N6U8 529 aaKnown RBP11.89□□□□□ -0.51
CLDND1-227ENST00000513452 LINC01465Q8N7H1 131 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 ST13P5Q8NFI4 369 aaPredicted RBP11.89□□□□□ -0.51
CLDND1-227ENST00000513452 NLRP7Q8WX94 980 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 SPATA6Q9NWH7 488 aaPredicted RBP11.89□□□□□ -0.51
CLDND1-227ENST00000513452 TCEAL9Q9UHQ7 104 aa11.89□□□□□ -0.51
CLDND1-227ENST00000513452 SMG5Q9UPR3 1016 aaKnown RBP11.89□□□□□ -0.51
CLDND1-227ENST00000513452 MEIS3P2A8K0S8 358 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 IPO5O00410 1097 aaKnown RBP11.88□□□□□ -0.51
CLDND1-227ENST00000513452 C2CD2LO14523 706 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 DHX15O43143 795 aaKnown RBP11.88□□□□□ -0.51
CLDND1-227ENST00000513452 LAMTOR5O43504 91 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 RFPL2O75678 378 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 SREBF1P36956 1147 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 AK2P54819 239 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 NAPAP54920 295 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 WWC2Q6AWC2 1192 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 TWF2Q6IBS0 349 aaKnown RBP11.88□□□□□ -0.51
CLDND1-227ENST00000513452 GET4Q7L5D6 327 aaPredicted RBP11.88□□□□□ -0.51
CLDND1-227ENST00000513452 CHD1LQ86WJ1 897 aa11.88□□□□□ -0.51
CLDND1-227ENST00000513452 PLA2G4DQ86XP0 818 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms