RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 DBF4BQ8NFT6 615 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 GOLPH3LQ9H4A5 285 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 IFT122Q9HBG6 1241 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 SFI1A8K8P3 1242 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 CSDE1O75534 798 aaKnown RBP23.28■■□□□ 1.32
NEIL3-202ENST00000513321 RPS6KA5O75582 802 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 FGBP02675 491 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 CD52P31358 61 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 SYKP43405 635 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 CACNB1Q02641 598 aaPredicted RBP23.28■■□□□ 1.32
NEIL3-202ENST00000513321 CAPSQ13938 189 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 TMEM240Q5SV17 173 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 TMEM87AQ8NBN3 555 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 BSNDQ8WZ55 320 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 STAMQ92783 540 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 DRC1Q96MC2 740 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.28■■□□□ 1.32
NEIL3-202ENST00000513321 REEP2Q9BRK0 252 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 IFIH1Q9BYX4 1025 aaKnown RBP23.28■■□□□ 1.32
NEIL3-202ENST00000513321 SERTAD1Q9UHV2 236 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 PADI3Q9ULW8 664 aa23.28■■□□□ 1.32
NEIL3-202ENST00000513321 SCN5AQ14524 2016 aa23.27■■□□□ 1.32
NEIL3-202ENST00000513321 TANC1Q9C0D5 1861 aa23.27■■□□□ 1.32
NEIL3-202ENST00000513321 LOXHD1Q8IVV2 1947 aa23.27■■□□□ 1.32
NEIL3-202ENST00000513321 MYMKA6NI61 221 aa23.27■■□□□ 1.32
NEIL3-202ENST00000513321 POU5F1BQ06416 359 aa23.27■■□□□ 1.32
NEIL3-202ENST00000513321 GIT2Q14161 759 aa23.27■■□□□ 1.32
NEIL3-202ENST00000513321 SEPT8Q92599 483 aa23.27■■□□□ 1.32
NEIL3-202ENST00000513321 IFT74Q96LB3 600 aa23.27■■□□□ 1.32
NEIL3-202ENST00000513321 KBTBD4Q9NVX7 518 aa23.27■■□□□ 1.32
NEIL3-202ENST00000513321 LRRIQ4A6NIV6 560 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 GADD45BO75293 160 aaPredicted RBP23.26■■□□□ 1.31
NEIL3-202ENST00000513321 SLFN14P0C7P3 912 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 BMP8BP34820 402 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 PHKA2P46019 1235 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 PTENP60484 403 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 TCTN1Q2MV58 587 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 LONRF3Q496Y0 759 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 CNKSR3Q6P9H4 555 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 PSRC1Q6PGN9 363 aaPredicted RBP23.26■■□□□ 1.31
NEIL3-202ENST00000513321 CHRDL2Q6WN34 429 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 DYMQ7RTS9 669 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 CEP57L1Q8IYX8 460 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 DDX12PQ92771 950 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 INO80BQ9C086 356 aaPredicted RBP23.26■■□□□ 1.31
NEIL3-202ENST00000513321 TNMDQ9H2S6 317 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 ODF2LQ9ULJ1 636 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 ST3GAL5Q9UNP4 418 aa23.26■■□□□ 1.31
NEIL3-202ENST00000513321 NFX1Q12986 1120 aaKnown RBP23.25■■□□□ 1.31
NEIL3-202ENST00000513321 PAK2Q13177 524 aa23.25■■□□□ 1.31
NEIL3-202ENST00000513321 PPP2R5AQ15172 486 aa23.25■■□□□ 1.31
NEIL3-202ENST00000513321 PRPF38BQ5VTL8 546 aaKnown RBP23.25■■□□□ 1.31
NEIL3-202ENST00000513321 OTOP2Q7RTS6 562 aa23.25■■□□□ 1.31
NEIL3-202ENST00000513321 SRGAP1Q7Z6B7 1085 aa23.25■■□□□ 1.31
NEIL3-202ENST00000513321 FAM228AQ86W67 206 aa23.25■■□□□ 1.31
NEIL3-202ENST00000513321 MINDY3Q9H8M7 445 aa23.25■■□□□ 1.31
NEIL3-202ENST00000513321 MAGEF1Q9HAY2 307 aa23.25■■□□□ 1.31
NEIL3-202ENST00000513321 USP25Q9UHP3 1055 aa23.25■■□□□ 1.31
NEIL3-202ENST00000513321 GPR182O15218 404 aa23.24■■□□□ 1.31
NEIL3-202ENST00000513321 ACTN4O43707 911 aaKnown RBP23.24■■□□□ 1.31
NEIL3-202ENST00000513321 PRPF40AO75400 957 aaKnown RBP23.24■■□□□ 1.31
NEIL3-202ENST00000513321 ACTN1P12814 892 aa23.24■■□□□ 1.31
NEIL3-202ENST00000513321 FGFR4P22455 802 aa23.24■■□□□ 1.31
NEIL3-202ENST00000513321 NAMPTP43490 491 aa23.24■■□□□ 1.31
NEIL3-202ENST00000513321 PEX3P56589 373 aa23.24■■□□□ 1.31
NEIL3-202ENST00000513321 AMPD3Q01432 767 aa23.24■■□□□ 1.31
NEIL3-202ENST00000513321 LRRC27Q9C0I9 530 aa23.24■■□□□ 1.31
NEIL3-202ENST00000513321 C17orf75Q9HAS0 396 aa23.24■■□□□ 1.31
NEIL3-202ENST00000513321 ERVK-5Q9HDB9 667 aa23.24■■□□□ 1.31
NEIL3-202ENST00000513321 TET1Q8NFU7 2136 aa23.24■■□□□ 1.31
NEIL3-202ENST00000513321 FAM13AO94988 1023 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 ZNF202O95125 648 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 PLS3P13797 630 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 IKBKEQ14164 716 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 SHHQ15465 462 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 ODR4Q5SWX8 454 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 C9orf50Q5SZB4 431 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 IFNLR1Q8IU57 520 aaPredicted RBP23.23■■□□□ 1.31
NEIL3-202ENST00000513321 APBB2Q92870 758 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 DNAJC19Q96DA6 116 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 GBP4Q96PP9 640 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 NFKBIZQ9BYH8 718 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 ZHX3Q9H4I2 956 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.23■■□□□ 1.31
NEIL3-202ENST00000513321 CCDC169A6NNP5 214 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 AFMP43652 599 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 NPTX2P47972 431 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 DMP1Q13316 513 aaPredicted RBP23.23■■□□□ 1.31
NEIL3-202ENST00000513321 FMR1NBQ8N0W7 255 aaPredicted RBP23.23■■□□□ 1.31
NEIL3-202ENST00000513321 DEPTORQ8TB45 409 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 PRO3102Q9H379 93 aa23.23■■□□□ 1.31
NEIL3-202ENST00000513321 LARSQ9P2J5 1176 aaKnown RBP23.23■■□□□ 1.31
NEIL3-202ENST00000513321 SIP14410 1827 aa23.22■■□□□ 1.31
NEIL3-202ENST00000513321 INO80B-WBP1J3KQ70 363 aa23.22■■□□□ 1.31
NEIL3-202ENST00000513321 TBCAO75347 108 aaKnown RBP23.22■■□□□ 1.31
NEIL3-202ENST00000513321 SFPQP23246 707 aaKnown RBP eCLIP23.22■■□□□ 1.31
NEIL3-202ENST00000513321 ZNF131P52739 623 aa23.22■■□□□ 1.31
NEIL3-202ENST00000513321 CATSPER4Q7RTX7 472 aa23.22■■□□□ 1.31
NEIL3-202ENST00000513321 MYCT1Q8N699 235 aa23.22■■□□□ 1.31
NEIL3-202ENST00000513321 ENGASEQ8NFI3 743 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms