RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 RANBP2P49792 3224 aaKnown RBP18.26■□□□□ 0.51
HMGCL-209ENST00000513148 GHRP10912 638 aa18.26■□□□□ 0.51
HMGCL-209ENST00000513148 EPHB4P54760 987 aa18.26■□□□□ 0.51
HMGCL-209ENST00000513148 SLC20A2Q08357 652 aa18.26■□□□□ 0.51
HMGCL-209ENST00000513148 PPIGQ13427 754 aaKnown RBP eCLIP18.26■□□□□ 0.51
HMGCL-209ENST00000513148 RESP18Q5W5W9 173 aa18.26■□□□□ 0.51
HMGCL-209ENST00000513148 NLRP7Q8WX94 980 aa18.26■□□□□ 0.51
HMGCL-209ENST00000513148 PSPC1Q8WXF1 523 aaKnown RBP18.26■□□□□ 0.51
HMGCL-209ENST00000513148 LARP4BQ92615 738 aaKnown RBP18.26■□□□□ 0.51
HMGCL-209ENST00000513148 RAD54LQ92698 747 aa18.26■□□□□ 0.51
HMGCL-209ENST00000513148 CELF4Q9BZC1 486 aaKnown RBP18.26■□□□□ 0.51
HMGCL-209ENST00000513148 POLR3FQ9H1D9 316 aaPredicted RBP18.26■□□□□ 0.51
HMGCL-209ENST00000513148 GAS2O43903 313 aaKnown RBP18.25■□□□□ 0.51
HMGCL-209ENST00000513148 GPR32O75388 356 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 SLC12A3P55017 1021 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 GPNMBQ14956 572 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 FAM26DQ5JW98 314 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 ADALQ6DHV7 355 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 CCDC73Q6ZRK6 1079 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 MCPH1Q8NEM0 835 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 TCP11Q8WWU5 503 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 PRPF31Q8WWY3 499 aaKnown RBP18.25■□□□□ 0.51
HMGCL-209ENST00000513148 DHX58Q96C10 678 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 COL4A3BPQ9Y5P4 624 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 TET1Q8NFU7 2136 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 A0A1B0GVL5 298 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 CYP11B2P19099 503 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 GPC3P51654 580 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 NAALADL2Q58DX5 795 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 RINT1Q6NUQ1 792 aa18.25■□□□□ 0.51
HMGCL-209ENST00000513148 SYT2Q8N9I0 419 aaPredicted RBP18.25■□□□□ 0.51
HMGCL-209ENST00000513148 IPO4Q8TEX9 1081 aaKnown RBP18.25■□□□□ 0.51
HMGCL-209ENST00000513148 SRGAP2CP0DJJ0 459 aa18.24■□□□□ 0.51
HMGCL-209ENST00000513148 LAMTOR4Q0VGL1 99 aa18.24■□□□□ 0.51
HMGCL-209ENST00000513148 CHRDL2Q6WN34 429 aa18.24■□□□□ 0.51
HMGCL-209ENST00000513148 GPBP1Q86WP2 473 aa18.24■□□□□ 0.51
HMGCL-209ENST00000513148 KCTD17Q8N5Z5 321 aa18.24■□□□□ 0.51
HMGCL-209ENST00000513148 ASAP3Q8TDY4 903 aa18.24■□□□□ 0.51
HMGCL-209ENST00000513148 TMEM40Q8WWA1 233 aa18.24■□□□□ 0.51
HMGCL-209ENST00000513148 GDF15Q99988 308 aa18.24■□□□□ 0.51
HMGCL-209ENST00000513148 UBE2OQ9C0C9 1292 aaKnown RBP18.24■□□□□ 0.51
HMGCL-209ENST00000513148 IL23AQ9NPF7 189 aa18.24■□□□□ 0.51
HMGCL-209ENST00000513148 STK17AQ9UEE5 414 aa18.24■□□□□ 0.51
HMGCL-209ENST00000513148 A0A087WZ62 844 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 NPHP3-ACAD11A0A0J9YXS1 232 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 POLR2DO15514 142 aaKnown RBP18.23■□□□□ 0.51
HMGCL-209ENST00000513148 PFKFB1P16118 471 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 RFC2P35250 354 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 CACNB1Q02641 598 aaPredicted RBP18.23■□□□□ 0.51
HMGCL-209ENST00000513148 LPIN1Q14693 890 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 FBXO47Q5MNV8 452 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 C1orf186Q6ZWK4 172 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 VWCEQ96DN2 955 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 FDXACB1Q9BRP7 624 aaPredicted RBP18.23■□□□□ 0.51
HMGCL-209ENST00000513148 ADAMTS10Q9H324 1103 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 GOLGA6L4A6NEF3 574 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 CSDE1O75534 798 aaKnown RBP18.23■□□□□ 0.51
HMGCL-209ENST00000513148 C16orf59Q7L2K0 433 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 CREBRFQ8IUR6 639 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 RPUSD2Q8IZ73 545 aaKnown RBP18.23■□□□□ 0.51
HMGCL-209ENST00000513148 RNF149Q8NC42 400 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 ARID3AQ99856 593 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 KCNH3Q9ULD8 1083 aa18.23■□□□□ 0.51
HMGCL-209ENST00000513148 HIP1RO75146 1068 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 PARNO95453 639 aaKnown RBP18.22■□□□□ 0.51
HMGCL-209ENST00000513148 CMA1P23946 247 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 ARL2P36404 184 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 CRYBB1P53674 252 aaPredicted RBP18.22■□□□□ 0.51
HMGCL-209ENST00000513148 FSIP1Q8NA03 581 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.22■□□□□ 0.51
HMGCL-209ENST00000513148 IFIH1Q9BYX4 1025 aaKnown RBP18.22■□□□□ 0.51
HMGCL-209ENST00000513148 MYH11P35749 1972 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 LAMA2P24043 3122 aaKnown RBP18.22■□□□□ 0.51
HMGCL-209ENST00000513148 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.22■□□□□ 0.51
HMGCL-209ENST00000513148 KRT18P05783 430 aaKnown RBP18.22■□□□□ 0.51
HMGCL-209ENST00000513148 GLRA2P23416 452 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 CD52P31358 61 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 CAPSQ13938 189 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 MXD4Q14582 209 aaPredicted RBP18.22■□□□□ 0.51
HMGCL-209ENST00000513148 E2F4Q16254 413 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 ARSHQ5FYA8 562 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 TSHZ1Q6ZSZ6 1077 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 ZNF365Q70YC5 407 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 OTOP2Q7RTS6 562 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 DBF4BQ8NFT6 615 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 MRPS27Q92552 414 aaKnown RBP18.22■□□□□ 0.51
HMGCL-209ENST00000513148 STAMQ92783 540 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 GOLPH3LQ9H4A5 285 aa18.22■□□□□ 0.51
HMGCL-209ENST00000513148 AGO3Q9H9G7 860 aaKnown RBP18.22■□□□□ 0.51
HMGCL-209ENST00000513148 NOC2LQ9Y3T9 749 aaKnown RBP18.22■□□□□ 0.51
HMGCL-209ENST00000513148 LRRIQ4A6NIV6 560 aa18.21■□□□□ 0.51
HMGCL-209ENST00000513148 SFI1A8K8P3 1242 aa18.21■□□□□ 0.51
HMGCL-209ENST00000513148 CXCL10P02778 98 aa18.21■□□□□ 0.51
HMGCL-209ENST00000513148 FGFR4P22455 802 aa18.21■□□□□ 0.51
HMGCL-209ENST00000513148 NDUFA8P51970 172 aa18.21■□□□□ 0.51
HMGCL-209ENST00000513148 NFX1Q12986 1120 aaKnown RBP18.21■□□□□ 0.51
HMGCL-209ENST00000513148 TCTN1Q2MV58 587 aa18.21■□□□□ 0.51
HMGCL-209ENST00000513148 C9orf50Q5SZB4 431 aa18.21■□□□□ 0.51
HMGCL-209ENST00000513148 PRPF38BQ5VTL8 546 aaKnown RBP18.21■□□□□ 0.51
HMGCL-209ENST00000513148 SV2BQ7L1I2 683 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms